LOC110493215 (LOC106573896)


Basic Information

Item Value
gene id LOC110493215
gene name LOC106573896
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17173402 ~ 17220957 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567512.2
GGGGGTATATTAATCGTACATTCAACatttatacatattttatttgacTTTTCTCTCTCAACACTTTCTCCAGGGCCTTTTGATTACCTTGAGCAACACTCTCATCTtgacccccccctcctcccattAAGTGGGAGTGACCACTGTTCCAACAGCACTGTCGCTTCTCAATTCTGCACTGGTGCGCTGTGGACTACACACTTGACGCGCGCCTTTTCAGAAACGGATTGTCTATGCTGAGTTTGCTTTCCTTGACATGtagtgttgacagtgttgggACTAGTTAGCGAAGATGTGCTGAAGCCACCGGTAAACGATAGCTTGTTGACAGTTATTTTTAGTTCCCGCTCGCGCACGATGAAAGAGAAACGGACCGCGAAATCACCAGTGGTGCACGGTGACAAGTGAAGTGCAAGCAGCAGTCAACAGAGGTCCCTTTTGGAAGGAATCGTAGAACGATGAAGTCgaggagagacaaactgaaaatcCCCTCTCTTACTTTGGATTTGTCACCCACTTGCCAAAGCCCAACTCTACTGAGCCCATGCAGCCCCTGCAGCCCTTTACAAACCCTTCATCCCTGGAGTTGCCGGAGCAGCAACAGGAAGAGTCTTGGCGTGGGGACACCATCTCCCACTCTGTCAcgccctctctccccactctccgtCCACACCGCTGCAAGCAGTCCCCTAGACAGCCCCCGGAATGTATCCACCTGTGCCTCCCTCAACTTCCCATTCGCTCGCAGAACGGAAGGCAGAAGATGGTCGCTGGCGTCCCTCCCCTCTTCCGGCTACGGAACCAATCCCCCCAGCTCTACAGTCTCTtcctcctcctcctcccaggagCGCCTGCACCAGCTGCCCTACCAGCCCACTCAAGACCAACTCCACTTCCTGTTCAAGCACTTCCTCAGCTCGGAGAATGTGGCCGACGAGGAAGTGCGACCCTCACCGTTCATGCGCCCTCGCTCCCACAGCCTCAGCCCCGCAAGAACAATGGGTTCATTCGATAATGAGGTCGTCATGATGAACCATGTTTACAAAGAACGTTTTCCTAAGGCCACACTGCAGATGGAGGAGCTCTTGCTGGATATCGTCACTGCCTGCTCCTCAGAAAGCACCCTCCCACTGTCTGATGGTGTACTGGGCTTCATCCAGCACCAGCTGGTGGAGCTGGTCCGAGACTGTCTGGACAAGTCCCACACGGGCCTGGTCACCTTGCACTACTTTGTGGAGTTGCAGGATAAACTGGAGAAGCTGCTCCACGAGGCGTACGATCGCTCGGAGAGCGAGGAGGTATCCGTCATCACCCAGCTGGTGAAGAAGATTCTCATCATCATATCCCGACCGGCGAGGCTGCTCGAGTGCctgGAATTTGACCCGGAAGAGTTCTATCATCTGCTGGAGGCAGCCGAGGGTCATGCCAAAGAGGGCCAGGGCATCAAGACGGACATTCCACGTTACATCATCAACCAACTGGGCTTGACTCGCGACCCCCTCGAAGATATGGTACAGCTTGAACAGTCTGCTCCGTCAATGACAGTGAAGTTTGATGAGTCGGTGGAGCAGAACAAGTGTCCACAGACCCCAACGCGAAGGAAACCACTGGAGAGTGACTTTGAAACCATCAAGCTCATCAGTAATGGAGCTTATGGGGCTGTGTACCTGGTCCGTCACAGAAACACCCGGCAGCGTTTCGCCATGAAGAAGATCAACCGGCAGAACCTAGTCCTGAGGAACCAGATCCAGCAGGTGTTTGTGGAGCGGGACATCCTGACCTTCGCCGAGAACCCCTTCGTGGTCTCCATGTTTTGCTCCTTCGAGACACGGCGCCACCTGTGCATGGTGATGGAGTATGTGGAAGGTGGGGACTGTGCCAACCTGCTAAAGAACATGGGCCCCCTTCCTGTGGACATGACCCGGATGTACTTTGCTGAGACTGTGCTGGCCTTAGAGTACCTTCACAACTACGGCATCGTCCATAGAGACCTCAAACCTGACAACTTGTTGATCACCTCTATGGGCCACATCAAACTGACTGACTTTGGCCTGTCCAGAGTTGGCCTGATGAACATGACTACCAACCTGTATGAGGGTCACATGGAGAAAGACACCAGGGAGTTCATCGACAAACAGGTGTGTGGCACCCCAGAGTACATAGCCCCAGAGGTGATACTGAGACAGGGCTATGGGAAGCCAGTAGACTGGTGGGCCATGGGCGTCATCCTGTATGAGTTCCTGGTTGGATGTGTGCCCTTCTTTGGGGACACGCCCGAGGAACTCTTTGGGCAAGTTGTCAGTGATGACATCACCTGGCCCGATGGGGACGAAGCTTTACCTGCAGACGCCCAGGACATGATCACACGGCTGCTGAGGCAGAGCCCTCTGGAGCGCCTGGGGACAGGAGGAGCACCTGAGGTCAAACGACACTGCTTTTTCTTGCATCTGGACTGGAACGGGCTACTGCGACAGAAAGCAGAATTCATCCCTCAACTGGAAGCGGAGGACGACACCAGCTACTTTGACACTCGCTCAGAGCGGTACCACCATTTGGCCTCAGATGAGGATGATGAAACCAACGATGAAGAGTCTTCCCTGGAAATCCGACAGTTCTCCTCCTGGTCAAACCGCTTCAGCAAGGTATACAGCAGCACAGAACATCTGGCCACGCCGTCCAACTTGAGCTTCTCATCGGGCCACAGCGAGGACAAGGAGGGCTGGGATGGATGTTTCACAACCTCTCCAGGAGGAGACATCCACAGACAGGAACGCCAGCACCAAGATCGCAAGGGCAGCCTGCGCCCTCGGGCCTCGTCCAGTTCCTCCCAGTCTGAAAGGAGCGCCAGCCCCCTGGTGATGAGAAGCACCCACAGTCTGGAGACCATGCCGCGCTTCACCTTCTCCACAGACGATGAAGCTGAGGTGGTTGTATCAAACCTGCATCGGATTCGTAGCAACAGCACCGGAGAGAAACACTCTTCCCCCAAGGACCACGGGGCCTCCCGACACTTTGGGAACCAGCTGGAGATGCCAGACAGTCCGAGGCTTGGGGGCAAACTACCCAAGTCTGCCTCCTTCTCCGCCCTGTCTCTTGTCATCACTGCAGACGACATGCCCGGCGGCCTCCAGGTCAGCCCCATCTTAATGCGCTCCCTCTCGTCCAACCCTTCATCACGCGACTCATCCCCCAGCCGAGACCTGTCGCTTAGCCTCAGCATCCTGGGGCCACCCATCGTCATCCACAGCTCGGGGAGGAAGTACGGCTTCACTATGCAGGCCATCCGCGTCTACATGGGCGACAGCTACATTTACACTGTGCACCACATGGTCTCGAATGTCGAAGATGGCAGCCCAGCCCATGAGGCAGGACTGAGGGCCAATGACCTCATCACTCATGTGAATGGAGAGTCGGTGCAAGGCCTGGTCCACACAGAGATAATGGAGCTGCTTCTGAAGAGTGGCGGCAAGGTGGCCCTTCAGACCACGGCACTGGAGAACACGTCAATCAAGGTTGGGCCGGCTCGAAAGACCAGCCACAAGGGCAAAATGGCAAGACGCAGCAAGAAAAGCAAGAGAAGGGATAATCAGGACAGGCGGCGGAGCATCCTGAAGAAGCTGTCCAAGCAAGTGATGCACAGCAGCCGAAGCTTCAACTCTGGCCTGCAGCACCACTCTGTGTCGTCCAGCGAGAGCCTGCCGGGCTCCCCCACACACAGCCTGTCCCCCGGCCCCTCCACCCCCTGTCGCAGCCCTGCCCCTGACCACCAGGCTGGAGACACCAACTCTCCACAGAGCACCTCTCCCAGCTCCAGCTCTCCCAGCTCCAGCTCTCCCAGCTCCCTGCATGGCCTGGCCTCCAAGCTGGGCACTCAGCGCTACACCAAGGTGGGTCGCCGCAAGTCCACCAGCAGCATCCCCCCATCCCCCCTGGCCTGCAACTCCTCCACCCAGCCCCTGTCACCCCAgcgctccccctcccccctctctggcATCACCAAGACCTTCCACCGTAAGACTCTGTCCCCCCCCACCATCGTCCGCCATTGTTTGCGCCCCCGCAGTGCCGAGCCGCCCCACTCCCCCCTCCTCAAGAGGGTGCAGTCAGCTGAGAGGCTCTCGAGCGCCTACCACACCGACAAGAAGTCGTACCCCCACCGAAGGCACACGTTGGAGGTGCCTTTCCAGGACAAGGTGGAGGGAGTCTGCGGCGGAGGGGACCACGGGAGGCTGCTGGTGGGGTACGGGGGCTGCCCGAGGCTGAAGGACTGGGCGTCGGAACGCTCAGAGCAGCTGGTGGTGATGAGGAAGCTCAACCTGTCGGAGCGCCGCGACTCCTTCAAGAAGCAGGAGGCGGTGCAGGAGGTGAGCTTTGATGAGCCTGACGACCAGAAGACCATCCCCACGGTCACCGCAACAACGCTCAACGCCCCTGGAGGCAATCGGGTCCCGCAGCGGGCGGCCTCCTGGACGGCTATTTCCCAAACCAGCGAGGAGTTGACTGTGGTGAAACGTTTCAACCTGGTGCCTCAGATTGCTGTGCAGGGCTTGATAGAGAGCGAGGACCAGGATGTCTGGGAGCCGTGCTCTGATGGAGAGGAGGACGACGGCGAGAGGCAGGAGCCCGAATCTACTGATTCCAACATCGGACCACAGCAGCCGAGCAAGGATGTCTCTCTCATGGTAAAAATCTCCAGTAAGGCACCAGAGGCGACAGCTGCTTTGCACAAAGAAATGCCTGCTTCGGATTAAGTTGGGGATACAGCAGTGGACTCTAGCCCCCAGAAAGGGAAGCTAAGGAAGTGACATTTCCTTGACTCATTTTATATAGCCATTTCTTCCAAGGAAGCACCTTGATACTCTCACTGCTGAAGGAAGGAAATGTTTGGGCGAAAGAGTATTTTGCCACATTGATTTTGTTTTGTAGATTTCACTTGATTCAGGACTTAGTTTTGTAAATATGTAACACCAGGAAATAGACTGCACTTTATTTCCTGGGCTTATTTATTACTTTTAAGCTAATAGGATTTATAATGGGGCCAAAAAAGGAAAGTGTTCAATTGATAGTGACTAGCCAAGATTAAATCTTGTTTTGTATTCATAGAaatatttattttctattgtCATGATTTTTCTAGAAATGTCTATTTTTAAACATGGTACAGAGTAGTTGATAATGGTAGGAATTTCACAGAAGTAAGTCGTTTTTGGAAAGGAAAGTTTTGACATTTTTTCTGCATTCATAAATGGAAAGTAGAAATGTATAAATCTTAATTTCGAAAGATTACCACAATTTGAAAGTTGTTCAGATTTAGGCTTGGAAACTGAGACTACAGTTTTGAATTATATTTTCAATCGTACAAAACTGTAGGGCAATTCTTATATCAACTAAAAACTGACCGAAGTAGTTCATGTGAAGACTACTcactatttgtttgttttttgttttattaaGCCATATCTTATGAACTGAAGGCCCTTTTTGTTTGACGAATAGATGTTATTTCCTTGTTGGCAGGCTTGACAGTTGCAGGAAAATGTAGTCTCCTTTACAAATATAGTTTATATTTCAAAGCaattttattttaactatttcGTTAAATCTTAGCCACCATAGAAATGAAAGCAAGTGTTTCACATGAAAATCAGTAACTAGTTAGTTTTAAAACCTGTTAATTATATTGCACAATATTCTGTCAACCTCATTGTCATGTTCGTTCATCCTGATGTTGTTCTATTGGGTTCATGGTTCTGCTGTACTGATTCTCATGGCAACAGGGTTTAACCCTTGGGTTTGCTGAAATCACAGTGGACTTAAATCAGTTGAACATTGGTGTAGCATGGCATTTTGAGCTTGCTGTTAATGCTTATACTACAAAAGCATGAAACCTTTTGTTTTTATCAAATACTGTTACCTCATCACTGTCACACAGGCAATTGTTGACAGGATATTGTTTTGATAAGGCACAGATGTTTTGCTCTTAACCCTGTTTTAGGCTACGTCCAGGAATACAGTTATCCAGGTGACACCACCAAGCTAAAGAGAAACGGTTTAAGCTTTCACGGGATCCGCTTGCATATTTTCAATTATCCTTGATACAGCCTTTGACCTTATCTacatttatacaacgggtgggtctaatcctgaatgctggtTGGTTAAAAGTGCATTCCAGGCGGTGTCTATTTCATCTTGTGCTTTTGCGTTGATGTTTACATTTGGGTAAAGTGCACTAAGGGAAATTACTATTTTGAcataacatatatatttttttacctattTTTATATGGAAGAGTCAATAATGAAGGAGCACCTCATACCTTCAGTCAGACCCCAGGGCTTAGATATTAACAGATGCTAGTTGTAGGTCtttgtactgtacatgtatatatTTTGATATCTGAGTCTAATTCTGTATGAATTGTTATTGTATATTTTGGAGTATACCAAGCAACGTGAACGATCAAGGCTGTAAAAATGGGTGTCTGATGCAGCAAGAATGAAGCTTGTTGGGGAATCACATCAGTATTGCAATGCATATAATACAATGCATATAATGAATTAGCTGTGTTGAACACCATCATTTTGGCCCATTTTATACACCAAAGTAGTTTTGAAGTCTGATATTGTCAAATGGTACTTCCTGTTATTTAACCCTCTTTATAAATCAAAAGTGGGGGGGCTCTTTAGAAGTCTCAACAGATCCTCAGACTATATTTTCAGACTGGATGAACTGCTCAGGACTCAGAAGTCAGTGGTGGTGAAATGAAGTTATACCGAAGACACACTTACTCGCAAAGTCAGAATTGTTAACAATGAACATGCTCTATACACAATTGAAACAAATATAATTTTGGAGTCCTGTATTTCTACTTAATGAAACCACTTTTTGATACCATGTACTGTGAAGCTATTGTGTTAGTCTGCACATTTCAGCACTACATCATTTTACACAAGTACCTTTTTGAACTAAATCTTCCTTAAACTGTTCTGTAGGAATAGTGTAGGATGCGGTTACTCTTCTGTTGGATGCATGCTGCATGAGACAAGGACACGTAATACTTGATTGCATGTAACGCTGGGTTTATAAAGCGCATGCTGTGGTTTTTAATGTGTGTCTAATAGCATTGTGTGCACAGTCAACTTTTGCACTTTCCTCTCACTCCTATTCATCATGCCCTGAACCAGATATGATCATATACAAATTTAAGCATGGTTTGAAATAAttgtgttttagtcaaatattattgcggtcaatttgcagtcaacTAATTATTTGGAATTTAGACTCCGATCCACCGACAATCGGCTCAAGAGAAAAATCGTCCGGTGGCTGAAaaagttgatgatccctgtcatGAGGGATGCATGTGGTTCATCAAGGGCTGGGAGTGAGCTTAGAAGGTTTGGCTACACATCAGTCTGCAATGCTTTCTTTTGCATTTAACCCTCATTCTGACGCTGTGCCATTTTGTCTGCTATCGAACACCTCTATTCTCACTTAGTTGTAGACTAAGGGCACCTGTATATTGTAGCACACTTACAGGGTAAAATGGAAGAACATGTCCACATTTATTATTTCTGTTTAATTGTGATTTTGTTAGCACTGTACCTCCAGTATTTCTAATTTCCATTGTATGTgaatatggatatactgtataagCCAACTATATCCGGCTAgtttctaaaaataaaaaaaaggtt

Function

NR:

description
microtubule-associated serine/threonine-protein kinase 3-like

GO: NA

KEGG:

id description
K08789 MAST; microtubule-associated serine/threonine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567512.2 True 7704 mRNA 0.49 27 17173402 17220957

Neighbor

gene id symbol gene type direction distance location
LOC110493506 LOC106573900 coding downstream 195 17140522 ~ 17173207 (-)
LOC110493631 LOC106573903 coding downstream 33010 17137016 ~ 17140392 (-)
rab3ab LOC106573906 coding downstream 212325 16943579 ~ 16961077 (-)
LOC110492528 LOC106573908 coding downstream 256966 16909202 ~ 16916436 (-)
LOC110492327 LOC106573910 coding downstream 268426 16884927 ~ 16904976 (-)
comp LOC106573894 coding upstream 93527 17314484 ~ 17326759 (-)
LOC110494221 LOC100194656 coding upstream 108970 17329927 ~ 17343550 (-)
LOC118942066 NA coding upstream 141942 17362899 ~ 17365492 (-)
LOC110531963 LOC106573889 coding upstream 169939 17390896 ~ 17392469 (-)
LOC118942412 NA coding upstream 207320 17428277 ~ 17436513 (-)
G16100 LOC106573897 non-coding downstream 37045 17131420 ~ 17136357 (-)
G16004 NA non-coding downstream 165074 17005929 ~ 17008328 (-)
G15742 NA non-coding downstream 201039 16972129 ~ 16972363 (-)
G15737 NA non-coding downstream 208514 16964522 ~ 16964888 (-)
G15718 NA non-coding downstream 240690 16932440 ~ 16932712 (-)
G16144 NA non-coding upstream 10423 17231380 ~ 17231678 (-)
G16150 NA non-coding upstream 17587 17238544 ~ 17238828 (-)
G16158 NA non-coding upstream 32833 17253790 ~ 17254418 (-)
G16160 NA non-coding upstream 36849 17257806 ~ 17258199 (-)
G16162 NA non-coding upstream 41421 17262378 ~ 17262650 (-)
LOC110492105 homer3 other downstream 301474 16838135 ~ 16871992 (-)
G15470 NA other downstream 641926 16531047 ~ 16531476 (-)
LOC110531395 LOC106613616 other downstream 957106 16181514 ~ 16295527 (-)
LOC110488740 cdc14a other downstream 1832521 15325555 ~ 15394233 (-)
G16161 LOC106573901 other upstream 34279 17255236 ~ 17257241 (-)
LOC110497564 LOC106573866 other upstream 868923 18089520 ~ 18098678 (-)
LOC110497762 LOC106573859 other upstream 1169166 18390123 ~ 18450517 (-)
mydgf LOC106573827 other upstream 1655920 18876547 ~ 18888907 (-)
LOC110502937 ccl25 other upstream 2409536 19630376 ~ 19633058 (-)

Expression


Co-expression Network