tmem72 (tmem72)


Basic Information

Item Value
gene id tmem72
gene name tmem72
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59511553 ~ 59516732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606312.2
AGACCGATTAGTACCCAGCCACTCACTGAGCGGCTCAGAAAGACTGAGCCCCATGGAGCTGTGTGGATGCTGCCTCTGTTGCCACTGTAACCCCTGGAGCTGAAATTGCATAGTTCATCTGTAGCTACTAAAGCTCACCTGTGAGATTGTACTGCAAAATGTCACATTAATATTGGCTCCAATAGAACCCACAGACTGACGTTTGAACTGGAGAGAGGTGGATTAGAGAAGGAAGAAAGAAGAGTTGTAAAAGAGGAGAGAAGTGTTTGCGCGATGGGCAGCGTGGTGACAGCCTGGTGGGTCGTGGTAGAGGTTGCCTGCAGGATTCTGGGTATTTCTACGTCAGCAGGAGTGGAGACGTTACGACAGGGGAAGTTCCACAGTCTGGCCATCTACCTGCTGGTGTCTGGGGCAGGTATGATGGTGTTTGAGGTAGCCTACTTCCTAGATGCCCTCCTGCAGATGTGTCTGCCtTTCCCCCCAGGGTggcgtgtgtttgtgttgtggggAAAGATGGCTCGTCTTGGAGGCTTTCAGAAGTTCCTCTACTACTCCATGATGTCAGTGGTGTGTTTCCTTCACCCTGTGTTAGTGTGGCATGCTGTTATACCAGGTAACACCACTCTACCAGGCATCATGCTCCTGGTCACAGCCTTCTTCAACTTCATCCTCAGCAAAAATACCGAAACAGTGTCCCCTAAAGACCTGGAGGACAATGTAGGGataacgtctgtgtgtgtgtctgagagaggagggacagaacaTACCTTCTCTTTCCTCCACATGGCGATGGGCAGGAGAGGGGCAGGGCTGGCCTTTGTACCCAGGGAGTGTGGCttgggagtgggggagagaggagagagcagccgGGCCATgctggaggtagagatggagcaGCCAGGGTCAGAGCTAGAGCgagtgaggaaagagaggaatAGACATGTGCATTTTCAGAACAGTGCTACAGAGGAGACAGAAATGGAGGAGTACCATGACTTTGAACCAGAGACCACCTCGGACACCGCTCCTATGATCACGAACTGAACATTACACTACTGTTATTCATTGAAGGCCCAGGACAatatggtggagaagagagactgAGCTCCATTGACATCAGCAGAGCTGTggcacagtggagaagatggCCAAAGACTGCCAGAAGTGGAGAACCTTGTCGGTGCGGAGGAGTGGACGAGTGAGTGTGTGACACTACAGAAGCAATACAGTTGGGGGTCAGCTGGAGcagggcttgaaccagggacctccTCAGACACCGCACATACACTACTATAGTAATGCAGGGGGACAGTTGAGGTGAGGTTTGAACAACGGGCTTTGAGGTTAAAGGTGAATTGTGGTGGTGGTGACTAACGTTTGGATGCTGATGCACATCAGTCAATGACCCAATGCCAAATAATGCATATAATCAATGGTCTATATACTATAGGAGAGTTAACTCATTGAAAACAGACTAACGTGTTTGCTTGCCCACTTCTTTCTTAGATTGAACACATTTCTGTTAGCTAATGGTAATATGAAGACCAGAAACACTGGCTTCGTATGATACAGGTGTGGGCCCCACATTCCACGAGCTGTAGGAGGGTCACACACTACACAGACGTTTGGGAAAGGCTGCTGACCGCACAGTCTTAAGTTTGACTTAATATATTGCATATGATgaagatgataatgatgatgattttAATGGTGATCATAATGAGGATGGCGATGGTGATCATTTAAAGTAAGGGTCTGATTTTAAGCGAGGCAGTCCACTAAGGTAAATGTATGTGCTGTATGGAATCTGTTTTAGCTGCACACGGAACATGTGTATAATGTTTTGCACATGTAGAATGATTTCTATAGTAATAAAACCCCTTTGTACCGAC
>XM_021606304.2
TGGAATGCTGTATAAACCGactaagtgtgtgcgtgtgcgtgtgcacaaGCTtgggtatttgtgtgtgtttcaacTTTGCTTTAGACCGATTAGTACCCAGCCACTCACTGAGCGGCTCAGAAAGACTGAGCCCCATGGAGCTGTGTGGATGCTGCCTCTGTTGCCACTGTAACCCCTGGAGCTGAAATTGCATAGTTCATCTGTAGCTACTAAAGCTCACCTGTGAGATTGTACTGCAAAATGTCACATTAATATTGGCTCCAATAGAACCCACAGACTGACGTTTGAACTGGAGAGAGGTGGATTAGAGAAGGAAGAAAGAAGAGTTGTAAAAGAGGAGAGAAGTGTTTGCGCGATGGGCAGCGTGGTGACAGCCTGGTGGGTCGTGGTAGAGGTTGCCTGCAGGATTCTGGGTATTTCTACGTCAGCAGTGCTTTGTGTTGTAGGAGTGGAGACGTTACGACAGGGGAAGTTCCACAGTCTGGCCATCTACCTGCTGGTGTCTGGGGCAGGTATGATGGTGTTTGAGGTAGCCTACTTCCTAGATGCCCTCCTGCAGATGTGTCTGCCtTTCCCCCCAGGGTggcgtgtgtttgtgttgtggggAAAGATGGCTCGTCTTGGAGGCTTTCAGAAGTTCCTCTACTACTCCATGATGTCAGTGGTGTGTTTCCTTCACCCTGTGTTAGTGTGGCATGCTGTTATACCAGGTAACACCACTCTACCAGGCATCATGCTCCTGGTCACAGCCTTCTTCAACTTCATCCTCAGCAAAAATACCGAAACAGTGTCCCCTAAAGACCTGGAGGACAATGTAGGGataacgtctgtgtgtgtgtctgagagaggagggacagaacaTACCTTCTCTTTCCTCCACATGGCGATGGGCAGGAGAGGGGCAGGGCTGGCCTTTGTACCCAGGGAGTGTGGCttgggagtgggggagagaggagagagcagccgGGCCATgctggaggtagagatggagcaGCCAGGGTCAGAGCTAGAGCgagtgaggaaagagaggaatAGACATGTGCATTTTCAGAACAGTGCTACAGAGGAGACAGAAATGGAGGAGTACCATGACTTTGAACCAGAGACCACCTCGGACACCGCTCCTATGATCACGAACTGAACATTACACTACTGTTATTCATTGAAGGCCCAGGACAatatggtggagaagagagactgAGCTCCATTGACATCAGCAGAGCTGTggcacagtggagaagatggCCAAAGACTGCCAGAAGTGGAGAACCTTGTCGGTGCGGAGGAGTGGACGAGTGAGTGTGTGACACTACAGAAGCAATACAGTTGGGGGTCAGCTGGAGcagggcttgaaccagggacctccTCAGACACCGCACATACACTACTATAGTAATGCAGGGGGACAGTTGAGGTGAGGTTTGAACAACGGGCTTTGAGGTTAAAGGTGAATTGTGGTGGTGGTGACTAACGTTTGGATGCTGATGCACATCAGTCAATGACCCAATGCCAAATAATGCATATAATCAATGGTCTATATACTATAGGAGAGTTAACTCATTGAAAACAGACTAACGTGTTTGCTTGCCCACTTCTTTCTTAGATTGAACACATTTCTGTTAGCTAATGGTAATATGAAGACCAGAAACACTGGCTTCGTATGATACAGGTGTGGGCCCCACATTCCACGAGCTGTAGGAGGGTCACACACTACACAGACGTTTGGGAAAGGCTGCTGACCGCACAGTCTTAAGTTTGACTTAATATATTGCATATGATgaagatgataatgatgatgattttAATGGTGATCATAATGAGGATGGCGATGGTGATCATTTAAAGTAAGGGTCTGATTTTAAGCGAGGCAGTCCACTAAGGTAAATGTATGTGCTGTATGGAATCTGTTTTAGCTGCACACGGAACATGTGTATAATGTTTTGCACATGTAGAATGATTTCTATAGTAATAAAACCCCTTTGTACCGAC
>XM_021606321.2
TGGAATGCTGTATAAACCGactaagtgtgtgcgtgtgcgtgtgcacaaGCTtgggtatttgtgtgtgtttcaacTTTGCTTTAGACCGATTAGTACCCAGCCACTCACTGAGCGGCTCAGAAAGACTGAGCCCCATGGAGCTGTGTGGATGCTGCCTCTGTTGCCACTGTAACCCCTGGAGCTGAAATTGCATAGTTCATCTGTAGCTACTAAAGCTCACCTGTGAGATTGTACTGCAAAATGTCACATTAATATTGGCTCCAATAGAACCCACAGACTGACGTTTGAACTGGAGAGAGGTGGATTAGAGAAGGAAGAAAGAAGAGTTGTAAAAGAGGAGAGAAGTGTTTGCGCGATGGGCAGCGTGGTGACAGCCTGGTGGGTCGTGGTAGAGGTTGCCTGCAGGATTCTGGGTATTTCTACGTCAGCAGTGCTTTGTGTTGTAGGAGTGGAGACGTTACGACAGGGGAAGTTCCACAGTCTGGCCATCTACCTGCTGGTGTCTGGGGCAGGTATGATGGTGTTTGAGGTAGCCTACTTCCTAGATGCCCTCCTGCAGATGTGTCTGCCtTTCCCCCCAGGGTggcgtgtgtttgtgttgtggggAAAGATGGCTCGTCTTGGAGGCTTTCAGAAGTTCCTCTACTACTCCATGATGTCAGTGGTGTGTTTCCTTCACCCTGTGTTAGTGTGGCATGCTGTTATACCAGGCATCATGCTCCTGGTCACAGCCTTCTTCAACTTCATCCTCAGCAAAAATACCGAAACAGTGTCCCCTAAAGACCTGGAGGACAATGTAGGGataacgtctgtgtgtgtgtctgagagaggagggacagaacaTACCTTCTCTTTCCTCCACATGGCGATGGGCAGGAGAGGGGCAGGGCTGGCCTTTGTACCCAGGGAGTGTGGCttgggagtgggggagagaggagagagcagccgGGCCATgctggaggtagagatggagcaGCCAGGGTCAGAGCTAGAGCgagtgaggaaagagaggaatAGACATGTGCATTTTCAGAACAGTGCTACAGAGGAGACAGAAATGGAGGAGTACCATGACTTTGAACCAGAGACCACCTCGGACACCGCTCCTATGATCACGAACTGAACATTACACTACTGTTATTCATTGAAGGCCCAGGACAatatggtggagaagagagactgAGCTCCATTGACATCAGCAGAGCTGTggcacagtggagaagatggCCAAAGACTGCCAGAAGTGGAGAACCTTGTCGGTGCGGAGGAGTGGACGAGTGAGTGTGTGACACTACAGAAGCAATACAGTTGGGGGTCAGCTGGAGcagggcttgaaccagggacctccTCAGACACCGCACATACACTACTATAGTAATGCAGGGGGACAGTTGAGGTGAGGTTTGAACAACGGGCTTTGAGGTTAAAGGTGAATTGTGGTGGTGGTGACTAACGTTTGGATGCTGATGCACATCAGTCAATGACCCAATGCCAAATAATGCATATAATCAATGGTCTATATACTATAGGAGAGTTAACTCATTGAAAACAGACTAACGTGTTTGCTTGCCCACTTCTTTCTTAGATTGAACACATTTCTGTTAGCTAATGGTAATATGAAGACCAGAAACACTGGCTTCGTATGATACAGGTGTGGGCCCCACATTCCACGAGCTGTAGGAGGGTCACACACTACACAGACGTTTGGGAAAGGCTGCTGACCGCACAGTCTTAAGTTTGACTTAATATATTGCATATGATgaagatgataatgatgatgattttAATGGTGATCATAATGAGGATGGCGATGGTGATCATTTAAAGTAAGGGTCTGATTTTAAGCGAGGCAGTCCACTAAGGTAAATGTATGTGCTGTATGGAATCTGTTTTAGCTGCACACGGAACATGTGTATAATGTTTTGCACATGTAGAATGATTTCTATAGTAATAAAACCCCTTTGTACCGAC

Function

symbol description
tmem72 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM72 (transmembrane protein 72).

NR:

description
transmembrane protein 72 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606312.2 False 1892 mRNA 0.48 5 59511553 59516650
XM_021606304.2 False 1989 mRNA 0.48 5 59511553 59516732
XM_021606321.2 True 1971 mRNA 0.48 5 59511553 59516732

Neighbor

gene id symbol gene type direction distance location
rassf4a rassf4 coding downstream 4485 59438585 ~ 59507068 (-)
si:dkey-275b16.2 paox coding downstream 89136 59406144 ~ 59422417 (-)
mtg1 mtg1 coding downstream 112873 59379812 ~ 59398680 (-)
echs1 echs1 coding downstream 143432 59349556 ~ 59368121 (-)
fuom fuom coding downstream 163316 59342322 ~ 59348237 (-)
LOC110532486 LOC106595224 coding upstream 125047 59549868 ~ 59644285 (-)
LOC118964951 NA coding upstream 500264 60016544 ~ 60024584 (-)
LOC110525944 LOC106576863 coding upstream 510486 60027218 ~ 60064906 (-)
LOC110525964 LOC106576862 coding upstream 573258 60089990 ~ 60124142 (-)
LOC110525977 LOC106576859 coding upstream 613583 60130315 ~ 60172542 (-)
G65817 NA non-coding downstream 46124 59460053 ~ 59465429 (-)
G65815 NA non-coding downstream 52834 59454033 ~ 59458719 (-)
G65751 NA non-coding downstream 176526 59334780 ~ 59335027 (-)
G65747 NA non-coding downstream 183280 59327995 ~ 59328273 (-)
G65746 NA non-coding downstream 184077 59327148 ~ 59327476 (-)
G65857 NA non-coding upstream 9134 59525866 ~ 59526216 (-)
G65862 NA non-coding upstream 16146 59532878 ~ 59533090 (-)
G65937 NA non-coding upstream 146880 59663612 ~ 59685746 (-)
G65982 NA non-coding upstream 213115 59729847 ~ 59736154 (-)
LOC110525695 LOC106576879 other downstream 356408 59144373 ~ 59199471 (-)
G65147 NA other downstream 725936 58784742 ~ 58785617 (-)
G63328 NA other downstream 2113065 57397194 ~ 57398488 (-)
G63093 NA other downstream 2448705 57035667 ~ 57062848 (-)
G61978 NA other downstream 2977578 56524970 ~ 56533975 (-)
LOC110526097 LOC106576849 other upstream 913475 60430184 ~ 60495300 (-)
G68736 NA other upstream 2165546 61682278 ~ 61686308 (-)
LOC110526417 LOC106576819 other upstream 2464999 61981652 ~ 61983330 (-)
G69210 NA other upstream 2894790 62411522 ~ 62418296 (-)
G70013 NA other upstream 3760476 63277208 ~ 63277752 (-)

Expression


Co-expression Network