LOC110529185 (mxi1)


Basic Information

Item Value
gene id LOC110529185
gene name mxi1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74171733 ~ 74183699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611321.2
TGGTGGGAGGGATTAACCACCAAGTAGGTAGGGCAAGTGGCTCAAGGACTGCACAATTTCATCTACTCCAGTtcatttcagtctctctctgcacTGTACAGTCTGGACAAGAGGACCTTCAGTCTCACTGGCAGTTGTCATAAAATAAAATAGTTAAATATATGAGACAGCAGAGCGAGTTGAAATCCAACGAGGTTGTTTTGGAGTCGGATGAGTCCATGGACCAACAAGATTTTAGCGAGATGTCTGGTTATTCTATTAACGACGTCATATACTCCGAATGTTCCGCAATGGAGCAAATCGACACTTTTATGAAAAACGTTCAGGTGTTGCTGGATGCAGCAAATTACATTGAAAACCATGAAAAGAACAACGGAAAATGTGAACATGGATATGCCTCAACATACCCTGCAACTCAAAGCACGCATCATCAGAGACAACGGAAATTCAAGAATAAGAAAATGGACAATATTCACAACAGGTCAGCACACAATGAGCTGGAAAAAAACAGACGAGCACATCTCCGCCTGTGTTTGGAGAGGTTAAAGATGTTGATCCCACTGGGACCAGACTGCAGTCGGCACACTACCCTGGGGTTGCTTAACAAGGCCAAGGGTCACATTAAGAAACTAGAGGAGATGGACCGGAGGAGCCAGCACCAGCTGGAAAGCCTGGAGCGAGAGCAGAGGCACCTGCAGAGGCAGCTGGCCCACCTGCAGACCCCCGGAGGcggagacagggacagggtcCGTATGGACAGCCTAGGTTCCCCTTTGGCCTCAGAGCACTCTGACTCGGACCAAGAAGAGATCAAGGTGGACGTGGAAAGCACCGACTTCTCCCACGGAGAGTTGGACAGTATCAGCACCAATGGCTGCAGTGACTTGGAAGACCACAACAGTCGGCAGAGCCTAGCCAGCGACGAGGGCTACTCCACCTGCAGCCTAAAACTGGCCTTTTCCTCCTAAGAACCAGCCTGAAGCTCCTAATCCACACCTGCAGTCTAAACGGGCCTTCTAAGAATCATCCTGACGCTCCTCATCCACACCTGCAGTTCCTCATCCACACCTGCAGTCTAAACTGGGCTTCTAAGAACCAGTCTAAAACTCCACTCCACCTGCGGTCTATAACTGGTCCTATACTATGAACCAACCTGAAGTTTTACTCCTTATGCAGTCTAAATCTGGACTCACCTAAGAACCAGCCTAAATCAAGAACCAGCTAAAAGCTAAACCCCACCTACAGTTTGAAAGGACAGATCTTACCTCAACTGTAAAATCTTGACTCTGATGTGTCTGTTACCCGTCTCCTCCTAAAACCAGCACAAAAATGACATAAAACCAGCCAGAAGCTCACCAGTGACAAGGGCAACTTTCCCCCCCACTTTGGAAACCCCTAGCAGATGACCATCTGAGAAAAGAAACAATTCTTGTCAATCACCAAGCAAGTTACTAGGGCTTCTCTATCTCCAATCCAAACCGCTTTTCTTATACAGTACCCACAGTTATACCCCAAATCTTTGACAAGCCACCAATGTTATTCCTACCATATGATtgagaaatgtatttattttcccaaTATTTATCGTGCTGTACTGTCTTGGTCACACTTGAATTATGAAATGAATGGATAATATTATTTGGATGTTTTgacaactgtaatgtttggtttTATATAAGTCTTGTGGTTTTGAACTGAGCGTTGACAAGTTCTTAGACAAAAGCTAGTGCAATGGTACACAACACGCTAAATGTATCACTCTGGTCTGTTGTGAGTGACATTTATCCCCGTTGAGATTTCAAAATAATTGTTTGTATACATTAGGCAGCTATGAGATATACCGCACTTCAAGGCCCAAGCACAATTCTGAAGCAATAACACTTGCCAGTCATGTCAACTCTTAAGTTGGCTGTTTTAGGCACACCATTTTGGCCATCAACACCAAATTGAATGTGCTTATTTTGTAACTTCAATAGCTTTAATTACAAATAGTAATCAATATTAAGATAATGGTTTGAACAAGTCATGTTGCATGTGTATTGAATGTAGTTCTCCATTTTTTCATCATGGGCTTTAGATTGACCAGTTGAGAGCTCATGTCTTTGTATTGATGAACACATGACAAGAGTTTTTACTTAGTAACTTATTTGTTGCATTGTAGCTAAGAAGCATTCCAATGTTAAAACCCTGACACTGTATATTCTGAGTATTTATGTACAAAAATCACTTTCCCCTAATTGCACTGCAAGACTATTCCACTAACCAAATTGGAAATGTCATCTTATGACCATACCCATATTTTTGTGGTACAACTAAATAGATTATCACCACCAACTGTGTCTTAACATGGCTAAATTGACTCTTGCACAGGTTTCTTAGTTCCAAGTCTTTATTCAGTGTCAGTGTTGGGTAATTTGTAAAACGCACTATGAAAAAGACTTGTCCTAAGAAAGTGTCTCTTAACACTACTGTGCTAAATCAGCCATCAAAGGTGACTTTTACAAAAGAACATGTTGCTGGCCCCCTGCTACCATTTTGTGTTTCCTGGTAGTGGTCCCTTAAACTAGATCAATAAACCTTTACCACCCCAGGTACCTATAGTGTCCAGTTGTTCCTTGTTATTGGTGTGTCCAAAG

Function

symbol description
mxi1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, including axial chorda mesoderm; median fin fold; nervous system; neural tube; and periderm. Human ortholog(s) of this gene implicated in neurofibrosarcoma and prostate cancer. Orthologous to human MXI1 (MAX interactor 1, dimerization protein).

NR:

description
max-interacting protein 1-like

GO: NA

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611321.2 True 2636 mRNA 0.43 6 74171733 74183699

Neighbor

gene id symbol gene type direction distance location
LOC110529161 add3 coding upstream 11462 74111112 ~ 74160271 (+)
LOC110529121 LOC106577020 coding upstream 163629 73952690 ~ 74008104 (+)
LOC118964464 NA coding upstream 228159 73943018 ~ 73943574 (+)
LOC110529112 sh3pxd2a coding upstream 361178 73715221 ~ 73810555 (+)
col17a1b col17a1 coding upstream 499426 73647943 ~ 73674938 (+)
LOC110529196 LOC106577022 coding downstream 6361 74190060 ~ 74192420 (+)
bnip3 bnip3 coding downstream 35271 74218970 ~ 74226765 (+)
ebf3a LOC106577027 coding downstream 84981 74268680 ~ 74342595 (+)
LOC118966714 NA coding downstream 472857 74656556 ~ 74656864 (+)
insyn2a fam196a coding downstream 498335 74682034 ~ 74709286 (+)
G82564 NA non-coding upstream 3557 74167938 ~ 74168176 (+)
G82241 NA non-coding upstream 496337 73675092 ~ 73675396 (+)
G82105 NA non-coding upstream 625458 73546001 ~ 73546275 (+)
G82064 NA non-coding upstream 671784 73499646 ~ 73499949 (+)
G82568 spf30 non-coding downstream 1889 74185588 ~ 74189683 (+)
G82575 NA non-coding downstream 9719 74193418 ~ 74193623 (+)
G82535 NA non-coding downstream 44204 74227903 ~ 74229003 (+)
G82975 NA non-coding downstream 52538 74236237 ~ 74236439 (+)
G82981 NA non-coding downstream 55761 74239460 ~ 74239703 (+)
G82111 LOC106577091 other upstream 599996 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3095631 71036440 ~ 71076239 (+)
G78121 NA other upstream 3516772 70571665 ~ 70654961 (+)
G75747 NA other upstream 5796804 68374505 ~ 68374929 (+)
G74139 NA other upstream 7386764 66784335 ~ 66784969 (+)
G83836 NA other downstream 725526 74909225 ~ 74909806 (+)
G83829 NA other downstream 928961 75112660 ~ 75114190 (+)
G83979 NA other downstream 961165 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 2274425 76457821 ~ 76459823 (+)
G86019 NA other downstream 2448046 76631745 ~ 76635936 (+)

Expression


Co-expression Network