G808


Basic Information

Item Value
gene id G808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 1692275 ~ 1703738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1025
attgtattatgacagaccagctagatcaactgtcgctattgtactatgacagaccagctatatctattgtctctattatcttatgacagaccagctagatctactgtctccatgtctctattatagtatgacacaccagctagatctgctgtctctactaTAATACGACaggacagctagatctactccctgttttctattatgacagaccaactagatctactgtctctattataatatgacagaccagatagatttactgtctctattatattatgacagagcagctagatctactgtctctattataatatgacaggccaggtcgatatactgtctctattatgctgtgacagaccagctagatctactgtctctattttaatttgacagaccagctagatatactgtctctattatgctatgacagaccagctagatctactatctctattataatatggcaccagctagatctactgtctctattattatatgacagaccagctagatctactgtctctattatattatgacagaccagctatatctactgtctctattataatatgacaccagctagatctactgtctctatgtgtctactatattatgagagaccagctagatctactgtctctattataatatgacaccagctagatctactgtctctattataatatgacagaccagctagatctactgtctctattatattatgacagattagctagatctactgtctctatattatgacagaccagctagatctactgtctctattataatatgacataccagctagatctactgtctctattatagtatgacaccagctagatctactgtctctattataatatgacagaccagctagatctactgtcgctattatattatgacagaccagctagatctactgtctttattatattatgagagaccagctagatctactgtctctatgtctctattatattatgacagaccagctagatctacagtctctatgtgtctactatattatgagaaaccagctagatctactgtctctattataatatgacagacccgctagatctactgtctctattataatatgacagaccagctagatcaactgtctctattgtactatgacagaccagctatatctactgtctctattataatatgacaggccagctagatctactccctgttttctattatgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1025 True 1218 lncRNA 0.35 2 1692275 1703738

Neighbor

gene id symbol gene type direction distance location
atp10a atp10a coding upstream 95656 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 293895 1334097 ~ 1398380 (+)
LOC118964682 NA coding upstream 364009 1327322 ~ 1328266 (+)
cyfip1 LOC106590724 coding upstream 391651 1173711 ~ 1300624 (+)
tubgcp5 tubgcp5 coding upstream 558367 1089396 ~ 1133908 (+)
LOC110520782 LOC106574119 coding downstream 29051 1732789 ~ 1770434 (+)
tmem131 LOC102783117 coding downstream 155639 1859377 ~ 1967576 (+)
nme7 at233 coding downstream 280588 1984326 ~ 2101039 (+)
dpt LOC106574207 coding downstream 472934 2176672 ~ 2192895 (+)
zbtb11 LOC106560622 coding downstream 508397 2212135 ~ 2258325 (+)
G803 NA non-coding upstream 4981 1684175 ~ 1687294 (+)
G771 NA non-coding upstream 125255 1566625 ~ 1567020 (+)
G768 NA non-coding upstream 133904 1557391 ~ 1558371 (+)
G767 NA non-coding upstream 135639 1556262 ~ 1556636 (+)
G745 NA non-coding upstream 195581 1495573 ~ 1496694 (+)
G805 NA non-coding downstream 7546 1711284 ~ 1724056 (+)
G824 NA non-coding downstream 35543 1739281 ~ 1751211 (+)
G836 NA non-coding downstream 64100 1767838 ~ 1768365 (+)
G848 NA non-coding downstream 106930 1810668 ~ 1811153 (+)
G901 NA non-coding downstream 193028 1896766 ~ 1897519 (+)
G583 NA other upstream 682068 1003783 ~ 1010207 (+)
G166 NA other upstream 1372301 318047 ~ 319974 (+)
G51 NA other upstream 1562012 120466 ~ 130263 (+)
G50 NA other upstream 1571968 112959 ~ 120307 (+)
G26 NA other upstream 1598557 56555 ~ 93718 (+)
G961 NA other downstream 375160 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 555145 2258883 ~ 2305334 (+)
G2016 NA other downstream 940597 2644335 ~ 2645169 (+)
G2343 NA other downstream 1510959 3214697 ~ 3216234 (+)
G2464 NA other downstream 1799531 3503269 ~ 3503581 (+)

Expression


Co-expression Network