G901


Basic Information

Item Value
gene id G901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 1896766 ~ 1897519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1134
gaggtgtggggCCACTTGGagtcaccagttagtcctctcactgaaacgcacagtttggagaggtgtggggCCACTAGGAGTCACCAGTTAGTCCTCACTGAAAcccagtttggagaggtgtggggCCACTTGGagtcaccagttagtcctctcactgaaacccacagtttggagaggtgtggggCCACTAGGagtcaccagttagtcctctcactgaaacccacagtctggagaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1134 True 237 lncRNA 0.46 2 1896766 1897519

Neighbor

gene id symbol gene type direction distance location
LOC110520782 LOC106574119 coding upstream 126332 1732789 ~ 1770434 (+)
atp10a atp10a coding upstream 300147 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 498386 1334097 ~ 1398380 (+)
LOC118964682 NA coding upstream 568500 1327322 ~ 1328266 (+)
cyfip1 LOC106590724 coding upstream 596142 1173711 ~ 1300624 (+)
nme7 at233 coding downstream 86807 1984326 ~ 2101039 (+)
dpt LOC106574207 coding downstream 279153 2176672 ~ 2192895 (+)
zbtb11 LOC106560622 coding downstream 314616 2212135 ~ 2258325 (+)
LOC110531937 LOC106574099 coding downstream 640815 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 1501907 3399426 ~ 3400148 (+)
G848 NA non-coding upstream 85613 1810668 ~ 1811153 (+)
G836 NA non-coding upstream 128401 1767838 ~ 1768365 (+)
G824 NA non-coding upstream 145555 1739281 ~ 1751211 (+)
G805 NA non-coding upstream 172710 1711284 ~ 1724056 (+)
G799 NA non-coding upstream 174483 1697646 ~ 1722283 (+)
G927 NA non-coding downstream 80588 1978107 ~ 1978417 (+)
G938 NA non-coding downstream 113423 2010942 ~ 2044901 (+)
G943 NA non-coding downstream 121571 2019090 ~ 2019513 (+)
G946 NA non-coding downstream 138337 2035856 ~ 2036555 (+)
G948 NA non-coding downstream 145834 2043353 ~ 2043710 (+)
G583 NA other upstream 886559 1003783 ~ 1010207 (+)
G166 NA other upstream 1576792 318047 ~ 319974 (+)
G51 NA other upstream 1766503 120466 ~ 130263 (+)
G50 NA other upstream 1776459 112959 ~ 120307 (+)
G26 NA other upstream 1803048 56555 ~ 93718 (+)
G961 NA other downstream 181379 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 361364 2258883 ~ 2305334 (+)
G2016 NA other downstream 746816 2644335 ~ 2645169 (+)
G2343 NA other downstream 1317178 3214697 ~ 3216234 (+)
G2464 NA other downstream 1605750 3503269 ~ 3503581 (+)

Expression


Co-expression Network