G927


Basic Information

Item Value
gene id G927
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 1978107 ~ 1978417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1162
TGTAAATACTATCCAAATGCTCTTTATATAACATATGTTGGTAGTATGAGGGTTAATACATCATTTATATAAACTCATATCAAAAGTATCATTTTAAAATAGTTATTAATTGCATAATCTGACTGTGGGATCACATAGTGTAGCAGTAATAAGAGCTCATCCCCTGTCCCCGCTGTGAAGCATCAGACCCAGACATGTCTCCATGTATCTGTCTTCGTAGCTCCGCTATGTGAGCAGGACTGATGCGGC

Function

NR:

description
uncharacterized protein LOC110527472

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1162 True 249 lncRNA 0.48 2 1978107 1978417

Neighbor

gene id symbol gene type direction distance location
tmem131 LOC102783117 coding upstream 10531 1859377 ~ 1967576 (+)
LOC110520782 LOC106574119 coding upstream 207673 1732789 ~ 1770434 (+)
atp10a atp10a coding upstream 381488 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 579727 1334097 ~ 1398380 (+)
LOC118964682 NA coding upstream 649841 1327322 ~ 1328266 (+)
nme7 at233 coding downstream 5909 1984326 ~ 2101039 (+)
dpt LOC106574207 coding downstream 198255 2176672 ~ 2192895 (+)
zbtb11 LOC106560622 coding downstream 233718 2212135 ~ 2258325 (+)
LOC110531937 LOC106574099 coding downstream 559917 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 1421009 3399426 ~ 3400148 (+)
G901 NA non-coding upstream 80588 1896766 ~ 1897519 (+)
G848 NA non-coding upstream 166954 1810668 ~ 1811153 (+)
G836 NA non-coding upstream 209742 1767838 ~ 1768365 (+)
G824 NA non-coding upstream 226896 1739281 ~ 1751211 (+)
G805 NA non-coding upstream 254051 1711284 ~ 1724056 (+)
G938 NA non-coding downstream 32525 2010942 ~ 2044901 (+)
G943 NA non-coding downstream 40673 2019090 ~ 2019513 (+)
G946 NA non-coding downstream 57439 2035856 ~ 2036555 (+)
G948 NA non-coding downstream 64936 2043353 ~ 2043710 (+)
G951 NA non-coding downstream 71942 2050359 ~ 2050631 (+)
G583 NA other upstream 967900 1003783 ~ 1010207 (+)
G166 NA other upstream 1658133 318047 ~ 319974 (+)
G51 NA other upstream 1847844 120466 ~ 130263 (+)
G50 NA other upstream 1857800 112959 ~ 120307 (+)
G26 NA other upstream 1884389 56555 ~ 93718 (+)
G961 NA other downstream 100481 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 280466 2258883 ~ 2305334 (+)
G2016 NA other downstream 665918 2644335 ~ 2645169 (+)
G2343 NA other downstream 1236280 3214697 ~ 3216234 (+)
G2464 NA other downstream 1524852 3503269 ~ 3503581 (+)

Expression


Co-expression Network