G943


Basic Information

Item Value
gene id G943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 2019090 ~ 2019513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1178
gtcttaggtctttatgtagtgttgtcttaggtctccctctatgtagtgttgtcttaggttttTATGTAgtattgtcttaggtctctctttatgtagtattgtcttaggtctctctttatgtagtgttgtcgtaggtctctatgtagtgttgtcttaggtctctctttatgtagtgttgtcttaggtctctctctgtctagtgttgtcttaggtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1178 True 214 lncRNA 0.50 2 2019090 2019513

Neighbor

gene id symbol gene type direction distance location
tmem131 LOC102783117 coding upstream 51514 1859377 ~ 1967576 (+)
LOC110520782 LOC106574119 coding upstream 248656 1732789 ~ 1770434 (+)
atp10a atp10a coding upstream 422471 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 620710 1334097 ~ 1398380 (+)
LOC118964682 NA coding upstream 690824 1327322 ~ 1328266 (+)
dpt LOC106574207 coding downstream 157159 2176672 ~ 2192895 (+)
zbtb11 LOC106560622 coding downstream 192622 2212135 ~ 2258325 (+)
LOC110531937 LOC106574099 coding downstream 518821 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 1379913 3399426 ~ 3400148 (+)
bcl6aa LOC106574104 coding downstream 1583150 3602663 ~ 3624582 (+)
G927 NA non-coding upstream 40673 1978107 ~ 1978417 (+)
G901 NA non-coding upstream 121571 1896766 ~ 1897519 (+)
G848 NA non-coding upstream 207937 1810668 ~ 1811153 (+)
G836 NA non-coding upstream 250725 1767838 ~ 1768365 (+)
G824 NA non-coding upstream 267879 1739281 ~ 1751211 (+)
G946 NA non-coding downstream 16343 2035856 ~ 2036555 (+)
G948 NA non-coding downstream 23840 2043353 ~ 2043710 (+)
G951 NA non-coding downstream 30846 2050359 ~ 2050631 (+)
G952 NA non-coding downstream 43666 2063179 ~ 2063685 (+)
G864 NA non-coding downstream 57203 2076716 ~ 2077288 (+)
G583 NA other upstream 1008883 1003783 ~ 1010207 (+)
G166 NA other upstream 1699116 318047 ~ 319974 (+)
G51 NA other upstream 1888827 120466 ~ 130263 (+)
G50 NA other upstream 1898783 112959 ~ 120307 (+)
G26 NA other upstream 1925372 56555 ~ 93718 (+)
G961 NA other downstream 59385 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 239370 2258883 ~ 2305334 (+)
G2016 NA other downstream 624822 2644335 ~ 2645169 (+)
G2343 NA other downstream 1195184 3214697 ~ 3216234 (+)
G2464 NA other downstream 1483756 3503269 ~ 3503581 (+)

Expression


Co-expression Network