G948


Basic Information

Item Value
gene id G948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 2043353 ~ 2043710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1187
GTGCTCAGCTCTTACTGTTTCCTATCAGGTTGTTTAGTAATATGTTGCAAGTGTAAAGACCAAACAACTGTGCTTCATGCAGAAAATCCTGTCCAGATATTACATTGTATGTGCTGCTATTCAATGACTAATTGGATGAAGGAATCCAGATTGTCCAGATATTACATTGTATGTGCTGCTATTCAATGACTAATTGGATGAAGGAATCCAGATTGTCCAGATATTACATTGTATGTGCTGCTATTCAATGACTAATTGGATGAAGGAATCCAGATTGTCCAGATATTACATTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1187 True 296 lncRNA 0.42 2 2043353 2043710

Neighbor

gene id symbol gene type direction distance location
tmem131 LOC102783117 coding upstream 75777 1859377 ~ 1967576 (+)
LOC110520782 LOC106574119 coding upstream 272919 1732789 ~ 1770434 (+)
atp10a atp10a coding upstream 446734 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 644973 1334097 ~ 1398380 (+)
LOC118964682 NA coding upstream 715087 1327322 ~ 1328266 (+)
dpt LOC106574207 coding downstream 132962 2176672 ~ 2192895 (+)
zbtb11 LOC106560622 coding downstream 168425 2212135 ~ 2258325 (+)
LOC110531937 LOC106574099 coding downstream 494624 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 1355716 3399426 ~ 3400148 (+)
bcl6aa LOC106574104 coding downstream 1558953 3602663 ~ 3624582 (+)
G946 NA non-coding upstream 6798 2035856 ~ 2036555 (+)
G943 NA non-coding upstream 23840 2019090 ~ 2019513 (+)
G927 NA non-coding upstream 64936 1978107 ~ 1978417 (+)
G901 NA non-coding upstream 145834 1896766 ~ 1897519 (+)
G848 NA non-coding upstream 232200 1810668 ~ 1811153 (+)
G951 NA non-coding downstream 6649 2050359 ~ 2050631 (+)
G952 NA non-coding downstream 19469 2063179 ~ 2063685 (+)
G864 NA non-coding downstream 33006 2076716 ~ 2077288 (+)
nme7 at233 non-coding downstream 54777 1984326 ~ 2101039 (+)
G853 NA non-coding downstream 75201 2118911 ~ 2130795 (+)
G583 NA other upstream 1033146 1003783 ~ 1010207 (+)
G166 NA other upstream 1723379 318047 ~ 319974 (+)
G51 NA other upstream 1913090 120466 ~ 130263 (+)
G50 NA other upstream 1923046 112959 ~ 120307 (+)
G26 NA other upstream 1949635 56555 ~ 93718 (+)
G961 NA other downstream 35188 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 215173 2258883 ~ 2305334 (+)
G2016 NA other downstream 600625 2644335 ~ 2645169 (+)
G2343 NA other downstream 1170987 3214697 ~ 3216234 (+)
G2464 NA other downstream 1459559 3503269 ~ 3503581 (+)

Expression


Co-expression Network