G1008


Basic Information

Item Value
gene id G1008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 2178498 ~ 2179040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1285
GTCTTCAGAGAGCCATCACCTAGTCTTCAGAGAGCCATCACGTAGTCTTCAGAGAGCCATCACGTAGTCTTCTGCTGAGCCATCACATAGTCTTCAGAGAGCCATCACATAGTCTTCAGAGAGCCATCACATAGTCTTCTACTGTATTCTAAAACCACTGAAGGTGGATTACAGAGACACGTGGCCTAGGGAAGGCAGGcaaggcacacacac

Function

NR:

description
PREDICTED: transmembrane protein 178A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1285 True 213 lncRNA 0.43 2 2178498 2179040

Neighbor

gene id symbol gene type direction distance location
nme7 at233 coding upstream 79814 1984326 ~ 2101039 (+)
tmem131 LOC102783117 coding upstream 210922 1859377 ~ 1967576 (+)
LOC110520782 LOC106574119 coding upstream 408064 1732789 ~ 1770434 (+)
atp10a atp10a coding upstream 581879 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 780118 1334097 ~ 1398380 (+)
zbtb11 LOC106560622 coding downstream 33095 2212135 ~ 2258325 (+)
LOC110531937 LOC106574099 coding downstream 359294 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 1220386 3399426 ~ 3400148 (+)
bcl6aa LOC106574104 coding downstream 1423623 3602663 ~ 3624582 (+)
LOC118965227 NA coding downstream 1644096 3822517 ~ 3826226 (+)
G996 NA non-coding upstream 11680 2166235 ~ 2166818 (+)
G985 NA non-coding upstream 36431 2141835 ~ 2142067 (+)
G983 NA non-coding upstream 38002 2140290 ~ 2140496 (+)
G980 NA non-coding upstream 42067 2136160 ~ 2136431 (+)
G973 NA non-coding upstream 52570 2123545 ~ 2125928 (+)
G1013 NA non-coding downstream 14314 2193354 ~ 2193717 (+)
G1000 NA non-coding downstream 43129 2222169 ~ 2226952 (+)
G999 NA non-coding downstream 43560 2222600 ~ 2223908 (+)
G1002 NA non-coding downstream 44995 2224035 ~ 2225731 (+)
G1028 NA non-coding downstream 46752 2225792 ~ 2228743 (+)
G961 NA other upstream 98895 2078898 ~ 2079603 (+)
G583 NA other upstream 1168291 1003783 ~ 1010207 (+)
G166 NA other upstream 1858524 318047 ~ 319974 (+)
G51 NA other upstream 2048235 120466 ~ 130263 (+)
G50 NA other upstream 2058191 112959 ~ 120307 (+)
G998 LOC106576565 other downstream 79843 2258883 ~ 2305334 (+)
G2016 NA other downstream 465295 2644335 ~ 2645169 (+)
G2343 NA other downstream 1035657 3214697 ~ 3216234 (+)
G2464 NA other downstream 1324229 3503269 ~ 3503581 (+)
G3176 NA other downstream 1996283 4175323 ~ 4178073 (+)

Expression


Co-expression Network