G1030


Basic Information

Item Value
gene id G1030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 2234533 ~ 2238220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1310
GCAGGGGGCTGAGGCGGGGGGCTGAGGCAGGAGGGGTCGTGAGACACTGTGGTCTGAGTCATGTATGACTGTCAGCCACCTCTCTTTAGAGATGATGTAGCTCTGAGTGAACAGAGATGTTATAGTGTTGTCTCCAGGGTTCCCCTACAGGCAGCCATCTCTCTTTAGAGATGATGTAGCTCTGAGTGAACAGAGATGTTATAGTGTTGTCTCtatcaTGTTTTAGTGAAATCTATCAGTTTCGGGCTTTTTTGCATTAAATTCTCAGTttaacaaattatttgtaattatgttctgccccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1310 True 306 lncRNA 0.48 2 2234533 2238220

Neighbor

gene id symbol gene type direction distance location
dpt LOC106574207 coding upstream 41638 2176672 ~ 2192895 (+)
nme7 at233 coding upstream 135849 1984326 ~ 2101039 (+)
tmem131 LOC102783117 coding upstream 266957 1859377 ~ 1967576 (+)
LOC110520782 LOC106574119 coding upstream 464099 1732789 ~ 1770434 (+)
atp10a atp10a coding upstream 637914 1460067 ~ 1596619 (+)
LOC110531937 LOC106574099 coding downstream 300114 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 1161206 3399426 ~ 3400148 (+)
bcl6aa LOC106574104 coding downstream 1364443 3602663 ~ 3624582 (+)
LOC118965227 NA coding downstream 1584916 3822517 ~ 3826226 (+)
trnap-cgg NA coding downstream 1609403 3847623 ~ 3847694 (+)
G1028 NA non-coding upstream 5790 2225792 ~ 2228743 (+)
G1000 NA non-coding upstream 7581 2222169 ~ 2226952 (+)
G1002 NA non-coding upstream 8802 2224035 ~ 2225731 (+)
G999 NA non-coding upstream 10625 2222600 ~ 2223908 (+)
G1013 NA non-coding upstream 40816 2193354 ~ 2193717 (+)
G998 LOC106576565 non-coding downstream 20663 2258883 ~ 2305334 (+)
G1069 NA non-coding downstream 74933 2313153 ~ 2313914 (+)
G1083 NA non-coding downstream 98225 2336445 ~ 2338735 (+)
G1085 NA non-coding downstream 101220 2339440 ~ 2340422 (+)
G1094 NA non-coding downstream 119462 2357682 ~ 2358726 (+)
G961 NA other upstream 154930 2078898 ~ 2079603 (+)
G583 NA other upstream 1224326 1003783 ~ 1010207 (+)
G166 NA other upstream 1914559 318047 ~ 319974 (+)
G51 NA other upstream 2104270 120466 ~ 130263 (+)
G50 NA other upstream 2114226 112959 ~ 120307 (+)
G2016 NA other downstream 406115 2644335 ~ 2645169 (+)
G2343 NA other downstream 976477 3214697 ~ 3216234 (+)
G2464 NA other downstream 1265049 3503269 ~ 3503581 (+)
G3176 NA other downstream 1937103 4175323 ~ 4178073 (+)

Expression


Co-expression Network