G2018


Basic Information

Item Value
gene id G2018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 2648027 ~ 2656615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2644
tgggatagaccagaggggatattctggggtagagcagaggggatattctggggtagagcagaggggatattctggggtagagcagaggggatattctggggtagagcaggggggatattctggggtagagcagaggggatattctggggtagaccagaagggatattctggggtagaccagAGGGGATATTATGGGGTAGAGCAAAGGGAATATTCTGGGGtacagcagaggggatattctggggtagagcagagggtaTATTCCGGGGTAgaccagaggggatattctggggtacagcagaggggatattctggggtagaccagaggggatattctggggtagagcagaggggatattctggggtagagcagaggggatattctggggtagagcagaggggatattctgtgGTAGAGATGAGGGGATGTTCttgggtagagcagaggggatattctggggtagagcagaggggatattctgggg

Function

NR:

description
endo-1,4-beta-xylanase B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2644 True 485 lncRNA 0.38 2 2648027 2656615

Neighbor

gene id symbol gene type direction distance location
LOC110531937 LOC106574099 coding upstream 67719 2538334 ~ 2580308 (+)
zbtb11 LOC106560622 coding upstream 389702 2212135 ~ 2258325 (+)
dpt LOC106574207 coding upstream 455132 2176672 ~ 2192895 (+)
nme7 at233 coding upstream 549343 1984326 ~ 2101039 (+)
tmem131 LOC102783117 coding upstream 680451 1859377 ~ 1967576 (+)
LOC118966170 NA coding downstream 742811 3399426 ~ 3400148 (+)
bcl6aa LOC106574104 coding downstream 946048 3602663 ~ 3624582 (+)
LOC118965227 NA coding downstream 1166521 3822517 ~ 3826226 (+)
trnap-cgg NA coding downstream 1191008 3847623 ~ 3847694 (+)
trnap-ugg NA coding downstream 1191273 3847888 ~ 3847959 (+)
G2004 LOC106574222 non-coding upstream 29465 2616569 ~ 2618562 (+)
G1961 NA non-coding upstream 110273 2537525 ~ 2537754 (+)
G1959 NA non-coding upstream 110983 2536747 ~ 2537044 (+)
G1958 NA non-coding upstream 111566 2536145 ~ 2536461 (+)
G1957 NA non-coding upstream 112232 2535583 ~ 2535795 (+)
G2084 NA non-coding downstream 126152 2782767 ~ 2784184 (+)
G2068 NA non-coding downstream 130203 2786818 ~ 2798145 (+)
G2223 NA non-coding downstream 159675 2816290 ~ 2816626 (+)
G2224 NA non-coding downstream 167605 2824220 ~ 2824983 (+)
G2225 NA non-coding downstream 168504 2825119 ~ 2825476 (+)
G2016 NA other upstream 2858 2644335 ~ 2645169 (+)
G998 LOC106576565 other upstream 384462 2258883 ~ 2305334 (+)
G961 NA other upstream 568424 2078898 ~ 2079603 (+)
G583 NA other upstream 1637820 1003783 ~ 1010207 (+)
G166 NA other upstream 2328053 318047 ~ 319974 (+)
G2343 NA other downstream 558082 3214697 ~ 3216234 (+)
G2464 NA other downstream 846654 3503269 ~ 3503581 (+)
G3176 NA other downstream 1518708 4175323 ~ 4178073 (+)
G3234 NA other downstream 1742289 4398904 ~ 4399444 (+)
G3351 NA other downstream 1783351 4439966 ~ 4441908 (+)

Expression


Co-expression Network