G2559


Basic Information

Item Value
gene id G2559
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 3756223 ~ 3764597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU3318
ATCAGTGCTGATGGAGGGGATGAACCTGGCTGGACGGAGGGCCTGCTGCTCGGTGCTGATTGAGGGGACGGACCTGGCTGGACGGAGGTCCTGCTGCTCGGTGCTGATTGAGGGGACGGACCTGGCTGGACGGAGGGCCTGCTGCTGGATGGCCAGGAGGGTACTGGTGTCCGTGGAGTTCCCGTGACGGAGGTGCTCCTGGATTAGACGGTGTAGAACCGTGCCAGAAGACGCCTCAGCAGTTCTCATCTCAGTCAATCAGAGAATATATAAGTGAATGGATGGGTTGAAGAGTTGGATGTTTTGGATTCTTAATAAACC

Function

NR:

description
angiomotin-like 2a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3318 True 321 lncRNA 0.48 2 3756223 3764597

Neighbor

gene id symbol gene type direction distance location
bcl6aa LOC106574104 coding upstream 131641 3602663 ~ 3624582 (+)
LOC118966170 NA coding upstream 356075 3399426 ~ 3400148 (+)
LOC110531937 LOC106574099 coding upstream 1175915 2538334 ~ 2580308 (+)
zbtb11 LOC106560622 coding upstream 1497898 2212135 ~ 2258325 (+)
dpt LOC106574207 coding upstream 1563328 2176672 ~ 2192895 (+)
LOC118965227 NA coding downstream 58539 3822517 ~ 3826226 (+)
trnap-cgg NA coding downstream 83026 3847623 ~ 3847694 (+)
trnap-ugg NA coding downstream 83291 3847888 ~ 3847959 (+)
im:7152348 LOC106573986 coding downstream 83920 3848517 ~ 3853009 (+)
agxta LOC105025628 coding downstream 1184130 4948727 ~ 4957086 (+)
G2426 NA non-coding upstream 83721 3650116 ~ 3672502 (+)
G2514 NA non-coding upstream 115268 3632338 ~ 3640955 (+)
G2525 NA non-coding upstream 119169 3636668 ~ 3637054 (+)
G2524 NA non-coding upstream 119718 3634581 ~ 3636505 (+)
G2481 NA non-coding upstream 208284 3547343 ~ 3547939 (+)
G2570 NA non-coding downstream 15692 3780289 ~ 3780678 (+)
G2585 NA non-coding downstream 49319 3813916 ~ 3814205 (+)
G2958 NA non-coding downstream 100404 3865001 ~ 3865275 (+)
G2963 NA non-coding downstream 103137 3867734 ~ 3871079 (+)
G2464 NA other upstream 252642 3503269 ~ 3503581 (+)
G2343 NA other upstream 539989 3214697 ~ 3216234 (+)
G2016 NA other upstream 1111054 2644335 ~ 2645169 (+)
G998 LOC106576565 other upstream 1492658 2258883 ~ 2305334 (+)
G961 NA other upstream 1676620 2078898 ~ 2079603 (+)
G3176 NA other downstream 410726 4175323 ~ 4178073 (+)
G3234 NA other downstream 634307 4398904 ~ 4399444 (+)
G3351 NA other downstream 675369 4439966 ~ 4441908 (+)
G3596 NA other downstream 1089924 4854521 ~ 4856248 (+)
G3597 NA other downstream 1091928 4856525 ~ 4857065 (+)

Expression


Co-expression Network