G2585


Basic Information

Item Value
gene id G2585
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 3813916 ~ 3814205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU3353
gagagactgaaaaacagcttctatctcaaggccattagtcTGTTAAATAGgcatcactagccagctaccacccggttactcaaccctgcaccttagaggctgctgccctatatacatagacatggaatcactggtcactttaataatggaacactggtcactttaataatggaacactggtcactttaataatggaacactggtcactttaataatggaacactggtcactgtctgcgcattatgccctgaatatattctaccatgcccagaaacctgctcctcttattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3353 True 290 lncRNA 0.38 1 3813916 3814205

Neighbor

gene id symbol gene type direction distance location
bcl6aa LOC106574104 coding upstream 189334 3602663 ~ 3624582 (+)
LOC118966170 NA coding upstream 413768 3399426 ~ 3400148 (+)
LOC110531937 LOC106574099 coding upstream 1233608 2538334 ~ 2580308 (+)
zbtb11 LOC106560622 coding upstream 1555591 2212135 ~ 2258325 (+)
dpt LOC106574207 coding upstream 1621021 2176672 ~ 2192895 (+)
LOC118965227 NA coding downstream 8931 3822517 ~ 3826226 (+)
trnap-cgg NA coding downstream 33418 3847623 ~ 3847694 (+)
trnap-ugg NA coding downstream 33683 3847888 ~ 3847959 (+)
im:7152348 LOC106573986 coding downstream 34312 3848517 ~ 3853009 (+)
agxta LOC105025628 coding downstream 1134522 4948727 ~ 4957086 (+)
G2570 NA non-coding upstream 33238 3780289 ~ 3780678 (+)
G2559 NA non-coding upstream 49319 3756223 ~ 3764597 (+)
G2426 NA non-coding upstream 141414 3650116 ~ 3672502 (+)
G2514 NA non-coding upstream 172961 3632338 ~ 3640955 (+)
G2958 NA non-coding downstream 50796 3865001 ~ 3865275 (+)
G2963 NA non-coding downstream 53529 3867734 ~ 3871079 (+)
G2971 NA non-coding downstream 66690 3880895 ~ 3881979 (+)
G2978 NA non-coding downstream 79886 3894091 ~ 3894468 (+)
G2464 NA other upstream 310335 3503269 ~ 3503581 (+)
G2343 NA other upstream 597682 3214697 ~ 3216234 (+)
G2016 NA other upstream 1168747 2644335 ~ 2645169 (+)
G998 LOC106576565 other upstream 1550351 2258883 ~ 2305334 (+)
G961 NA other upstream 1734313 2078898 ~ 2079603 (+)
G3176 NA other downstream 361118 4175323 ~ 4178073 (+)
G3234 NA other downstream 584699 4398904 ~ 4399444 (+)
G3351 NA other downstream 625761 4439966 ~ 4441908 (+)
G3596 NA other downstream 1040316 4854521 ~ 4856248 (+)
G3597 NA other downstream 1042320 4856525 ~ 4857065 (+)

Expression


Co-expression Network