G3033


Basic Information

Item Value
gene id G3033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 4042873 ~ 4043357 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU3950
CAAAAGATTTCTCTTCATGGGGAACAGTTCTGAAACAATTCAAGCGAAGACAACACAAAAAGTTGGTTTATAACGTCGTACTGAATAGTCCTGTTCAATATCTTGTTTAAATTACATTAAACTATAATatatacaatgcatttggaaaatatttagactgcttgactttttccacattttgttatgttacagccttattttaaaatggattacactgttttttcttctcatcaatctacacacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaatactccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaatactccataatgacatgacAATACTCCATA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3950 True 443 lncRNA 0.54 2 4042873 4043357

Neighbor

gene id symbol gene type direction distance location
im:7152348 LOC106573986 coding upstream 189864 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 194914 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 195179 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 217008 3822517 ~ 3826226 (+)
bcl6aa LOC106574104 coding upstream 418291 3602663 ~ 3624582 (+)
agxta LOC105025628 coding downstream 905370 4948727 ~ 4957086 (+)
LOC110526525 LOC106613452 coding downstream 1620814 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 2515710 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 2640742 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 2985193 7028550 ~ 7056518 (+)
G3032 NA non-coding upstream 2233 4037612 ~ 4040640 (+)
G3012 NA non-coding upstream 60608 3979678 ~ 3982265 (+)
G3002 NA non-coding upstream 80509 3961234 ~ 3962364 (+)
G2992 NA non-coding upstream 104728 3937793 ~ 3938145 (+)
G2990 NA non-coding upstream 109255 3931650 ~ 3933618 (+)
G3040 NA non-coding downstream 10518 4053875 ~ 4054431 (+)
G3043 NA non-coding downstream 27802 4071159 ~ 4078757 (+)
G3044 NA non-coding downstream 29424 4072781 ~ 4075895 (+)
G3045 NA non-coding downstream 33563 4076920 ~ 4079416 (+)
G3151 NA non-coding downstream 80817 4124174 ~ 4124677 (+)
G2464 NA other upstream 539292 3503269 ~ 3503581 (+)
G2343 NA other upstream 826639 3214697 ~ 3216234 (+)
G2016 NA other upstream 1397704 2644335 ~ 2645169 (+)
G998 LOC106576565 other upstream 1779308 2258883 ~ 2305334 (+)
G961 NA other upstream 1963270 2078898 ~ 2079603 (+)
G3176 NA other downstream 131966 4175323 ~ 4178073 (+)
G3234 NA other downstream 355547 4398904 ~ 4399444 (+)
G3351 NA other downstream 396609 4439966 ~ 4441908 (+)
G3596 NA other downstream 811164 4854521 ~ 4856248 (+)
G3597 NA other downstream 813168 4856525 ~ 4857065 (+)

Expression


Co-expression Network