G3427


Basic Information

Item Value
gene id G3427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 4611590 ~ 4612779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU4430
GAGACTAGAGTCTACAGAAACTAGAGTCTACAGAGTCTACAGAGACGAGAGTTTACAGAGACTAGAGTCTACAGAGACTAGAGTCTACAGAGTCTACAGAGACTAGAGTCTACAGAGACTAGAGTCTACAGAGTCTACAGAGACTAGAGTCTACAGAGACTAGAGTCTACAGAGTCTACAGAGACTACAGAGACTATAGAGTCTACAGAGACTAGAGTCTACAGAGACTAGAGTCTACAGAGACTACAGAGACTACAGAGTCTACAGAGACTAGAGTCTACAGAGACTAGAGTCTACAGAGTCTACAGAGACTAGAGTCTATAGAGACTAGAGTCTATAGAGACTAGAGTCTATAGAGTCTACAGAGACTAGAGTCTACAGAGACTAGAGTCTCTAGAGTCTATAGAGTCTACAGAGACTAGAGTCTACAGAGACTGGAGTCTATAGAAACTACAGAGACTAGAGTCTACAGAGTCTACAGAGTCTACAGAGACTAGAGTCTACAGAAACTACAGAGACTAGAGTCTACAGAGTCTACAGAGTCTACAGAGACTAGAGTCTATAGAGTCTATAGAGACTAGAGTCTACAGAGACTAGAGACTACAGAGACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4430 True 612 lncRNA 0.39 4 4611590 4612779

Neighbor

gene id symbol gene type direction distance location
im:7152348 LOC106573986 coding upstream 758581 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 763631 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 763896 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 785725 3822517 ~ 3826226 (+)
bcl6aa LOC106574104 coding upstream 987008 3602663 ~ 3624582 (+)
agxta LOC105025628 coding downstream 335948 4948727 ~ 4957086 (+)
LOC110526525 LOC106613452 coding downstream 1051392 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 1946288 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 2071320 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 2415771 7028550 ~ 7056518 (+)
G3417 NA non-coding upstream 18001 4592685 ~ 4593589 (+)
G3377 NA non-coding upstream 113399 4489992 ~ 4498191 (+)
G3375 NA non-coding upstream 121670 4482723 ~ 4489920 (+)
G3354 NA non-coding upstream 158007 4444881 ~ 4453583 (+)
G3357 NA non-coding upstream 159813 4450860 ~ 4451777 (+)
G3521 klhl30 non-coding downstream 79469 4692248 ~ 4695358 (+)
G3522 NA non-coding downstream 82809 4695588 ~ 4700054 (+)
G3540 NA non-coding downstream 135579 4748358 ~ 4816025 (+)
G3544 NA non-coding downstream 149470 4762249 ~ 4762604 (+)
G3569 NA non-coding downstream 194242 4807021 ~ 4807264 (+)
G3351 NA other upstream 169682 4439966 ~ 4441908 (+)
G3234 NA other upstream 212146 4398904 ~ 4399444 (+)
G3176 NA other upstream 433517 4175323 ~ 4178073 (+)
G2464 NA other upstream 1108009 3503269 ~ 3503581 (+)
G2343 NA other upstream 1395356 3214697 ~ 3216234 (+)
G3596 NA other downstream 241742 4854521 ~ 4856248 (+)
G3597 NA other downstream 243746 4856525 ~ 4857065 (+)
G5276 NA other downstream 1904703 6517482 ~ 6518189 (+)
G5581 NA other downstream 2198215 6810994 ~ 6811621 (+)
G6434 NA other downstream 3112267 7725046 ~ 7725609 (+)

Expression


Co-expression Network