G3544


Basic Information

Item Value
gene id G3544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 4762249 ~ 4762604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU4622
AAGGTGTGTTGTCAGGTAAAGTTATCTAAAGGTGTGTTGGCAGGTAAAGATGTCAGGTAAAGTTATCTAAAGGTATGTTGTCAGGTAAAGTTATCTAAAGGTTTGTCGTCAGGTAAAGTTATCTACAGGTATGTCGTCAGGTAAAGTTATCTAAAGGTATGTCGTCAGGTAAAGTTATCTAAAGGTATGTCGTCAGGTAAAGTTATCTAAAGGTGTGTTGGCAGGTAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4622 True 231 lncRNA 0.34 2 4762249 4762604

Neighbor

gene id symbol gene type direction distance location
im:7152348 LOC106573986 coding upstream 909240 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 914290 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 914555 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 936384 3822517 ~ 3826226 (+)
bcl6aa LOC106574104 coding upstream 1137667 3602663 ~ 3624582 (+)
agxta LOC105025628 coding downstream 186123 4948727 ~ 4957086 (+)
LOC110526525 LOC106613452 coding downstream 901567 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 1796463 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 1921495 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 2265946 7028550 ~ 7056518 (+)
G3522 NA non-coding upstream 62195 4695588 ~ 4700054 (+)
G3521 klhl30 non-coding upstream 66891 4692248 ~ 4695358 (+)
G3416 NA non-coding upstream 135449 4588656 ~ 4626800 (+)
G3569 NA non-coding downstream 44417 4807021 ~ 4807264 (+)
G3575 NA non-coding downstream 52422 4815026 ~ 4820692 (+)
G3576 NA non-coding downstream 59462 4822066 ~ 4823158 (+)
G3580 NA non-coding downstream 65336 4827940 ~ 4828266 (+)
G3601 LOC106573836 non-coding downstream 107367 4869971 ~ 4871942 (+)
G3351 NA other upstream 320341 4439966 ~ 4441908 (+)
G3234 NA other upstream 362805 4398904 ~ 4399444 (+)
G3176 NA other upstream 584176 4175323 ~ 4178073 (+)
G2464 NA other upstream 1258668 3503269 ~ 3503581 (+)
G2343 NA other upstream 1546015 3214697 ~ 3216234 (+)
G3596 NA other downstream 91917 4854521 ~ 4856248 (+)
G3597 NA other downstream 93921 4856525 ~ 4857065 (+)
G5276 NA other downstream 1754878 6517482 ~ 6518189 (+)
G5581 NA other downstream 2048390 6810994 ~ 6811621 (+)
G6434 NA other downstream 2962442 7725046 ~ 7725609 (+)

Expression


Co-expression Network