Gene
RNA
| Item | Value |
|---|---|
| gene id | G3569 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 4807021 ~ 4807264 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: alpha carbonic anhydrase 8-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4647 | True | 211 | lncRNA | 0.49 | 2 | 4807021 | 4807264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| im:7152348 | LOC106573986 | coding | upstream | 954012 | 3848517 ~ 3853009 (+) |
| trnap-ugg | NA | coding | upstream | 959062 | 3847888 ~ 3847959 (+) |
| trnap-cgg | NA | coding | upstream | 959327 | 3847623 ~ 3847694 (+) |
| LOC118965227 | NA | coding | upstream | 981156 | 3822517 ~ 3826226 (+) |
| bcl6aa | LOC106574104 | coding | upstream | 1182439 | 3602663 ~ 3624582 (+) |
| agxta | LOC105025628 | coding | downstream | 141463 | 4948727 ~ 4957086 (+) |
| LOC110526525 | LOC106613452 | coding | downstream | 856907 | 5664171 ~ 5767693 (+) |
| LOC110527749 | armc9 | coding | downstream | 1751803 | 6559067 ~ 6651795 (+) |
| b3gnt7 | b3gnt7 | coding | downstream | 1876835 | 6684099 ~ 6700304 (+) |
| alpi.1 | LOC106574189 | coding | downstream | 2221286 | 7028550 ~ 7056518 (+) |
| G3544 | NA | non-coding | upstream | 44417 | 4762249 ~ 4762604 (+) |
| G3522 | NA | non-coding | upstream | 106967 | 4695588 ~ 4700054 (+) |
| G3521 | klhl30 | non-coding | upstream | 111663 | 4692248 ~ 4695358 (+) |
| G3416 | NA | non-coding | upstream | 180221 | 4588656 ~ 4626800 (+) |
| G3575 | NA | non-coding | downstream | 7762 | 4815026 ~ 4820692 (+) |
| G3576 | NA | non-coding | downstream | 14802 | 4822066 ~ 4823158 (+) |
| G3580 | NA | non-coding | downstream | 20676 | 4827940 ~ 4828266 (+) |
| G3601 | LOC106573836 | non-coding | downstream | 62707 | 4869971 ~ 4871942 (+) |
| G3605 | NA | non-coding | downstream | 76730 | 4883994 ~ 4884355 (+) |
| G3351 | NA | other | upstream | 365113 | 4439966 ~ 4441908 (+) |
| G3234 | NA | other | upstream | 407577 | 4398904 ~ 4399444 (+) |
| G3176 | NA | other | upstream | 628948 | 4175323 ~ 4178073 (+) |
| G2464 | NA | other | upstream | 1303440 | 3503269 ~ 3503581 (+) |
| G2343 | NA | other | upstream | 1590787 | 3214697 ~ 3216234 (+) |
| G3596 | NA | other | downstream | 47257 | 4854521 ~ 4856248 (+) |
| G3597 | NA | other | downstream | 49261 | 4856525 ~ 4857065 (+) |
| G5276 | NA | other | downstream | 1710218 | 6517482 ~ 6518189 (+) |
| G5581 | NA | other | downstream | 2003730 | 6810994 ~ 6811621 (+) |
| G6434 | NA | other | downstream | 2917782 | 7725046 ~ 7725609 (+) |
