G5669


Basic Information

Item Value
gene id G5669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6886262 ~ 6886485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7084
catagggtggcgaacaattggcccagcatcgtccgggtttgtccggggtaggccgtcattgtaaataagaatttgttcttaactgacttacctagttaaataaaagttaaataaaggtttaattaaACATCAActtgatagttttaaccatgttttgacaGGGGTTTGTTTACATTCGCATTGTTTATAAACATAGCTTCTATTTTGGTTTCTGATAAGGCACC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7084 True 224 lncRNA 0.45 1 6886262 6886485

Neighbor

gene id symbol gene type direction distance location
b3gnt7 b3gnt7 coding upstream 185958 6684099 ~ 6700304 (+)
LOC110527749 armc9 coding upstream 234467 6559067 ~ 6651795 (+)
LOC110526525 LOC106613452 coding upstream 1118569 5664171 ~ 5767693 (+)
agxta LOC105025628 coding upstream 1929176 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 3033253 3848517 ~ 3853009 (+)
alpi.1 LOC106574189 coding downstream 142065 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 177883 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 209814 7096299 ~ 7107509 (+)
LOC118966183 NA coding downstream 443967 7330452 ~ 7331042 (+)
LOC110528450 LOC106574163 coding downstream 528128 7414613 ~ 7550394 (+)
G5583 NA non-coding upstream 73487 6812508 ~ 6812775 (+)
G5580 NA non-coding upstream 75988 6810044 ~ 6810274 (+)
G5567 NA non-coding upstream 76985 6792756 ~ 6809277 (+)
G5366 NA non-coding upstream 137396 6748327 ~ 6748866 (+)
G5365 ncl non-coding upstream 138630 6742471 ~ 6747632 (+)
G5705 NA non-coding downstream 29967 6916452 ~ 6916713 (+)
G5712 NA non-coding downstream 35788 6922273 ~ 6922647 (+)
G5713 NA non-coding downstream 37266 6923751 ~ 6923995 (+)
G5774 NA non-coding downstream 80285 6966770 ~ 6966984 (+)
G5780 NA non-coding downstream 83055 6969540 ~ 6969874 (+)
G5581 NA other upstream 74641 6810994 ~ 6811621 (+)
G5276 NA other upstream 368073 6517482 ~ 6518189 (+)
G3597 NA other upstream 2029197 4856525 ~ 4857065 (+)
G3596 NA other upstream 2030014 4854521 ~ 4856248 (+)
G3351 NA other upstream 2444354 4439966 ~ 4441908 (+)
G6434 NA other downstream 838561 7725046 ~ 7725609 (+)
G6518 NA other downstream 998906 7885391 ~ 7885907 (+)
G6807 NA other downstream 1150132 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 1342812 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 1368657 8255142 ~ 8271732 (+)

Expression


Co-expression Network