G5867


Basic Information

Item Value
gene id G5867
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7139541 ~ 7140409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7311
GGAAATAGGAAATATGCCAAAAGTATGGAAATCATCTCTTGTGCTGCCACTCCATAAAGACGGGGAAAGTAGTGATCTCAATAAATATCACCCCATTCCAAGGCTTCCTTGTCTATGATTCTAGAATCCTTGGTAAATGTACAactttgctaaaaaaaaaaatacattctgaGTAATGTATTTTGAATATAAATcaatcagggtttagtcctggacaacaaccactacagtcagggtttagtcctggacaacaaccactacagtcagggtttagtcctggacaacaaccactacagtcagggtttagtcctggacaacaaccactacagtcagggtttagtcctggacatagtactattacaacaaccactacagtcagggtttagtcctggacaacaaccattacagtcagggtttagtcctgaacacagtactattacaacaaccactacagtcagggtttagtcctggacaacaaccactacagtcagggtttagtcctgaacatagtactattacaacaaccactacagtcagggtttagtcctggacaacaaccactacagtcagggtttagtcctggacaacaacc

Function

NR:

description
RNA-directed DNA polymerase from mobile element jockey

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7311 True 592 lncRNA 0.48 2 7139541 7140409

Neighbor

gene id symbol gene type direction distance location
ankle1 LOC106574192 coding upstream 32032 7096299 ~ 7107509 (+)
alpi.2 LOC106574193 coding upstream 45321 7064368 ~ 7094220 (+)
alpi.1 LOC106574189 coding upstream 83023 7028550 ~ 7056518 (+)
b3gnt7 b3gnt7 coding upstream 439237 6684099 ~ 6700304 (+)
LOC110527749 armc9 coding upstream 487746 6559067 ~ 6651795 (+)
LOC118966183 NA coding downstream 190043 7330452 ~ 7331042 (+)
LOC110528450 LOC106574163 coding downstream 274204 7414613 ~ 7550394 (+)
LOC110528753 LOC106574165 coding downstream 601153 7741562 ~ 7839951 (+)
LOC110528839 LOC106574168 coding downstream 700271 7840680 ~ 7882886 (+)
LOC110528925 hykk coding downstream 760352 7900761 ~ 7935217 (+)
G5847 NA non-coding upstream 29601 7109728 ~ 7109940 (+)
G5846 NA non-coding upstream 31156 7108108 ~ 7108385 (+)
G5822 NA non-coding upstream 55005 7031984 ~ 7084536 (+)
G5820 NA non-coding upstream 77367 7058141 ~ 7062174 (+)
G5815 NA non-coding upstream 125888 7012089 ~ 7013653 (+)
G5868 NA non-coding downstream 153 7140562 ~ 7141294 (+)
G5882 NA non-coding downstream 17747 7158156 ~ 7158421 (+)
G5883 NA non-coding downstream 18712 7159121 ~ 7160271 (+)
G5892 NA non-coding downstream 35393 7175802 ~ 7176272 (+)
G5904 NA non-coding downstream 52035 7192444 ~ 7194417 (+)
G5581 NA other upstream 327920 6810994 ~ 6811621 (+)
G5276 NA other upstream 621352 6517482 ~ 6518189 (+)
G3597 NA other upstream 2282476 4856525 ~ 4857065 (+)
G3596 NA other upstream 2283293 4854521 ~ 4856248 (+)
G3351 NA other upstream 2697633 4439966 ~ 4441908 (+)
G6434 NA other downstream 584637 7725046 ~ 7725609 (+)
G6518 NA other downstream 744982 7885391 ~ 7885907 (+)
G6807 NA other downstream 896208 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 1088888 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 1114733 8255142 ~ 8271732 (+)

Expression


Co-expression Network