Gene
RNA
| Item | Value |
|---|---|
| gene id | G5868 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 7140562 ~ 7141294 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU7313 | False | 280 | lncRNA | 0.53 | 3 | 7140562 | 7141294 |
| TU7312 | True | 345 | lncRNA | 0.54 | 3 | 7140741 | 7141294 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankle1 | LOC106574192 | coding | upstream | 33053 | 7096299 ~ 7107509 (+) |
| alpi.2 | LOC106574193 | coding | upstream | 46342 | 7064368 ~ 7094220 (+) |
| alpi.1 | LOC106574189 | coding | upstream | 84044 | 7028550 ~ 7056518 (+) |
| b3gnt7 | b3gnt7 | coding | upstream | 440258 | 6684099 ~ 6700304 (+) |
| LOC110527749 | armc9 | coding | upstream | 488767 | 6559067 ~ 6651795 (+) |
| LOC118966183 | NA | coding | downstream | 189158 | 7330452 ~ 7331042 (+) |
| LOC110528450 | LOC106574163 | coding | downstream | 273319 | 7414613 ~ 7550394 (+) |
| LOC110528753 | LOC106574165 | coding | downstream | 600268 | 7741562 ~ 7839951 (+) |
| LOC110528839 | LOC106574168 | coding | downstream | 699386 | 7840680 ~ 7882886 (+) |
| LOC110528925 | hykk | coding | downstream | 759467 | 7900761 ~ 7935217 (+) |
| G5867 | NA | non-coding | upstream | 153 | 7139541 ~ 7140409 (+) |
| G5847 | NA | non-coding | upstream | 30622 | 7109728 ~ 7109940 (+) |
| G5846 | NA | non-coding | upstream | 32177 | 7108108 ~ 7108385 (+) |
| G5822 | NA | non-coding | upstream | 56026 | 7031984 ~ 7084536 (+) |
| G5820 | NA | non-coding | upstream | 78388 | 7058141 ~ 7062174 (+) |
| G5882 | NA | non-coding | downstream | 16862 | 7158156 ~ 7158421 (+) |
| G5883 | NA | non-coding | downstream | 17827 | 7159121 ~ 7160271 (+) |
| G5892 | NA | non-coding | downstream | 34508 | 7175802 ~ 7176272 (+) |
| G5904 | NA | non-coding | downstream | 51150 | 7192444 ~ 7194417 (+) |
| G5943 | NA | non-coding | downstream | 142370 | 7283664 ~ 7284594 (+) |
| G5581 | NA | other | upstream | 328941 | 6810994 ~ 6811621 (+) |
| G5276 | NA | other | upstream | 622373 | 6517482 ~ 6518189 (+) |
| G3597 | NA | other | upstream | 2283497 | 4856525 ~ 4857065 (+) |
| G3596 | NA | other | upstream | 2284314 | 4854521 ~ 4856248 (+) |
| G3351 | NA | other | upstream | 2698654 | 4439966 ~ 4441908 (+) |
| G6434 | NA | other | downstream | 583752 | 7725046 ~ 7725609 (+) |
| G6518 | NA | other | downstream | 744097 | 7885391 ~ 7885907 (+) |
| G6807 | NA | other | downstream | 895323 | 8036617 ~ 8037154 (+) |
| LOC110501328 | LOC106574178 | other | downstream | 1088003 | 8229189 ~ 8231566 (+) |
| LOC110505168 | LOC106574179 | other | downstream | 1113848 | 8255142 ~ 8271732 (+) |
