G5904


Basic Information

Item Value
gene id G5904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7192444 ~ 7194417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7361
CATTAaccctacagtaacattacattaaccctacagtaacattaaccctacagtaacattaaccctacagtaacattacattaaccctacggtaacattacattaaccctacagtaacattacattaaccctacagtaacattacattaaccctacagtaacattacattaaccctacagtaacattacattaaccctacagtaacattacattaaccctacggtaacattacattaaccctacggtaacattacattaaccctacggtaacattacattaaccctacagtaacattacattaaccctacagtaacattacattaaacctacagtaacattacattaaccctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7361 True 354 lncRNA 0.32 2 7192444 7194417

Neighbor

gene id symbol gene type direction distance location
ankle1 LOC106574192 coding upstream 84935 7096299 ~ 7107509 (+)
alpi.2 LOC106574193 coding upstream 98224 7064368 ~ 7094220 (+)
alpi.1 LOC106574189 coding upstream 135926 7028550 ~ 7056518 (+)
b3gnt7 b3gnt7 coding upstream 492140 6684099 ~ 6700304 (+)
LOC110527749 armc9 coding upstream 540649 6559067 ~ 6651795 (+)
LOC118966183 NA coding downstream 136035 7330452 ~ 7331042 (+)
LOC110528450 LOC106574163 coding downstream 220196 7414613 ~ 7550394 (+)
LOC110528753 LOC106574165 coding downstream 547145 7741562 ~ 7839951 (+)
LOC110528839 LOC106574168 coding downstream 646263 7840680 ~ 7882886 (+)
LOC110528925 hykk coding downstream 706344 7900761 ~ 7935217 (+)
G5849 NA non-coding upstream 431 7111520 ~ 7192013 (+)
G5892 NA non-coding upstream 16172 7175802 ~ 7176272 (+)
G5883 NA non-coding upstream 32173 7159121 ~ 7160271 (+)
G5882 NA non-coding upstream 34023 7158156 ~ 7158421 (+)
G5868 NA non-coding upstream 51150 7140562 ~ 7141294 (+)
G5943 NA non-coding downstream 89247 7283664 ~ 7284594 (+)
G5986 NA non-coding downstream 357932 7552349 ~ 7553098 (+)
G6426 NA non-coding downstream 501863 7696280 ~ 7696531 (+)
G6435 NA non-coding downstream 524491 7718908 ~ 7720218 (+)
G6445 NA non-coding downstream 545208 7739625 ~ 7739824 (+)
G5581 NA other upstream 380823 6810994 ~ 6811621 (+)
G5276 NA other upstream 674255 6517482 ~ 6518189 (+)
G3597 NA other upstream 2335379 4856525 ~ 4857065 (+)
G3596 NA other upstream 2336196 4854521 ~ 4856248 (+)
G3351 NA other upstream 2750536 4439966 ~ 4441908 (+)
G6434 NA other downstream 530629 7725046 ~ 7725609 (+)
G6518 NA other downstream 690974 7885391 ~ 7885907 (+)
G6807 NA other downstream 842200 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 1034880 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 1060725 8255142 ~ 8271732 (+)

Expression


Co-expression Network