G6445


Basic Information

Item Value
gene id G6445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7739625 ~ 7739824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7963
atagagctcaatttttatggaatggtctgcctatccatatgagagacacagactcggtctcaacctttaagtctttattgaagactcatctcttcagtagttcctatgattgagtgtagtctggcccaggagtgtgaaggtgaacggaaaggcactggagcaatgaaccgcccttgctgtctctgcctggctggttcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU7963 True 200 lncRNA 0.38 1 7739625 7739824

Neighbor

gene id symbol gene type direction distance location
LOC110528450 LOC106574163 coding upstream 189231 7414613 ~ 7550394 (+)
LOC118966183 NA coding upstream 408583 7330452 ~ 7331042 (+)
ankle1 LOC106574192 coding upstream 632116 7096299 ~ 7107509 (+)
alpi.2 LOC106574193 coding upstream 645405 7064368 ~ 7094220 (+)
alpi.1 LOC106574189 coding upstream 683107 7028550 ~ 7056518 (+)
LOC110528753 LOC106574165 coding downstream 1738 7741562 ~ 7839951 (+)
LOC110528839 LOC106574168 coding downstream 100856 7840680 ~ 7882886 (+)
LOC110528925 hykk coding downstream 160937 7900761 ~ 7935217 (+)
LOC118966768 NA coding downstream 212969 7952793 ~ 7952888 (+)
nmur1a LOC106574171 coding downstream 309171 8048995 ~ 8085970 (+)
G6435 NA non-coding upstream 19407 7718908 ~ 7720218 (+)
G6426 NA non-coding upstream 43094 7696280 ~ 7696531 (+)
G5986 NA non-coding upstream 186527 7552349 ~ 7553098 (+)
G5943 NA non-coding upstream 455031 7283664 ~ 7284594 (+)
G5904 NA non-coding upstream 545208 7192444 ~ 7194417 (+)
G6501 NA non-coding downstream 105021 7844845 ~ 7845416 (+)
G6522 NA non-coding downstream 153931 7893755 ~ 7894244 (+)
G6526 NA non-coding downstream 157971 7897795 ~ 7898103 (+)
G6497 NA non-coding downstream 163713 7903537 ~ 7905319 (+)
G6434 NA other upstream 14016 7725046 ~ 7725609 (+)
G5581 NA other upstream 928004 6810994 ~ 6811621 (+)
G5276 NA other upstream 1221436 6517482 ~ 6518189 (+)
G3597 NA other upstream 2882560 4856525 ~ 4857065 (+)
G3596 NA other upstream 2883377 4854521 ~ 4856248 (+)
G6518 NA other downstream 145567 7885391 ~ 7885907 (+)
G6807 NA other downstream 296793 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 489473 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 515318 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1719124 9450932 ~ 9460358 (+)

Expression


Co-expression Network