G6501


Basic Information

Item Value
gene id G6501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7844845 ~ 7845416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8030
ctagaagaaaaagaaacgcacacctattcagacgaggtgctggctagcggagtagaacacctattaagacgaggtgctggctagaggagtagaaacttgaaaataaaagagagccgcacactctaggagctcagatgcaaaaatgtaataccaacgtttcgacagccaagctgtcttcatcagggtataatcacaaacactgcgggatgactcgtttatatagtgtcaaaagacacaggtgtctgtaatcatggccaagagtggcctaatatcattggttaattatcaaatattaaaatgtcatacaaagaacagcatacaaacaacaaatggatagcatacgatcatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8030 True 350 lncRNA 0.46 2 7844845 7845416

Neighbor

gene id symbol gene type direction distance location
LOC110528753 LOC106574165 coding upstream 4911 7741562 ~ 7839951 (+)
LOC110528450 LOC106574163 coding upstream 294451 7414613 ~ 7550394 (+)
LOC118966183 NA coding upstream 513803 7330452 ~ 7331042 (+)
ankle1 LOC106574192 coding upstream 737336 7096299 ~ 7107509 (+)
alpi.2 LOC106574193 coding upstream 750625 7064368 ~ 7094220 (+)
LOC110528925 hykk coding downstream 55345 7900761 ~ 7935217 (+)
LOC118966768 NA coding downstream 107377 7952793 ~ 7952888 (+)
nmur1a LOC106574171 coding downstream 203579 8048995 ~ 8085970 (+)
LOC110529397 LOC106574172 coding downstream 306657 8152073 ~ 8162387 (+)
LOC100135997 LOC100135997 coding downstream 336821 8117910 ~ 8197019 (+)
G6445 NA non-coding upstream 105021 7739625 ~ 7739824 (+)
G6435 NA non-coding upstream 124627 7718908 ~ 7720218 (+)
G6426 NA non-coding upstream 148314 7696280 ~ 7696531 (+)
G5986 NA non-coding upstream 291747 7552349 ~ 7553098 (+)
G6522 NA non-coding downstream 48339 7893755 ~ 7894244 (+)
G6526 NA non-coding downstream 52379 7897795 ~ 7898103 (+)
G6497 NA non-coding downstream 58121 7903537 ~ 7905319 (+)
G6803 NA non-coding downstream 188068 8033484 ~ 8033732 (+)
G6812 NA non-coding downstream 195619 8041035 ~ 8041418 (+)
G6434 NA other upstream 119236 7725046 ~ 7725609 (+)
G5581 NA other upstream 1033224 6810994 ~ 6811621 (+)
G5276 NA other upstream 1326656 6517482 ~ 6518189 (+)
G3597 NA other upstream 2987780 4856525 ~ 4857065 (+)
G3596 NA other upstream 2988597 4854521 ~ 4856248 (+)
G6518 NA other downstream 39975 7885391 ~ 7885907 (+)
G6807 NA other downstream 191201 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 383881 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 409726 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1613532 9450932 ~ 9460358 (+)

Expression


Co-expression Network