G6522


Basic Information

Item Value
gene id G6522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7893755 ~ 7894244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8053
gacaatatgagtatcatgtagtagcctaaacctatcgatgttacattgaactgggtgaatggaatatgaatgacagtcatccaacgcGCTGTAAAGAAAGAAggccatgtgtaacagtataactttagaccgtcccctcgcccatacccgggcgcgaaccagggaccctctgcacacatcaacaactgacacccacgaagcatcgttacccatcgctccacaaaagccgtggcccttgcagagcaaggggaactactacttcaaggtctcagagcaagtgacgtcaccgattgaaaagctatttagcgcgcaccgctaactaagctagccgttacACATGCTCATGAGAAAGGtatattgtcctccctcatcataaacggcactgaccgccactggtaTTACAATGTCTCagcaagtattcataccctttgacttattccacattttgtgttacagcctgatttcaaaattgattaaatatgtccccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8053 True 490 lncRNA 0.41 1 7893755 7894244

Neighbor

gene id symbol gene type direction distance location
LOC110528839 LOC106574168 coding upstream 10869 7840680 ~ 7882886 (+)
LOC110528753 LOC106574165 coding upstream 53821 7741562 ~ 7839951 (+)
LOC110528450 LOC106574163 coding upstream 343361 7414613 ~ 7550394 (+)
LOC118966183 NA coding upstream 562713 7330452 ~ 7331042 (+)
ankle1 LOC106574192 coding upstream 786246 7096299 ~ 7107509 (+)
LOC110528925 hykk coding downstream 6517 7900761 ~ 7935217 (+)
LOC118966768 NA coding downstream 58549 7952793 ~ 7952888 (+)
nmur1a LOC106574171 coding downstream 154751 8048995 ~ 8085970 (+)
LOC110529397 LOC106574172 coding downstream 257829 8152073 ~ 8162387 (+)
LOC100135997 LOC100135997 coding downstream 287993 8117910 ~ 8197019 (+)
G6501 NA non-coding upstream 48339 7844845 ~ 7845416 (+)
G6445 NA non-coding upstream 153931 7739625 ~ 7739824 (+)
G6435 NA non-coding upstream 173537 7718908 ~ 7720218 (+)
G6426 NA non-coding upstream 197224 7696280 ~ 7696531 (+)
G6526 NA non-coding downstream 3551 7897795 ~ 7898103 (+)
G6497 NA non-coding downstream 9293 7903537 ~ 7905319 (+)
G6803 NA non-coding downstream 139240 8033484 ~ 8033732 (+)
G6812 NA non-coding downstream 146791 8041035 ~ 8041418 (+)
G6518 NA other upstream 7848 7885391 ~ 7885907 (+)
G6434 NA other upstream 168146 7725046 ~ 7725609 (+)
G5581 NA other upstream 1082134 6810994 ~ 6811621 (+)
G5276 NA other upstream 1375566 6517482 ~ 6518189 (+)
G3597 NA other upstream 3036690 4856525 ~ 4857065 (+)
G6807 NA other downstream 142373 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 335053 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 360898 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1564704 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 2089531 9980527 ~ 9991542 (+)

Expression


Co-expression Network