G6497


Basic Information

Item Value
gene id G6497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7903537 ~ 7905319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8026
atcactacatctaacccataacacactatactctatcactacatctaacccataacacactatactctatcattacatctaacccataacacactatactctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactcctatatcactacatctaacccataacacactatactctatcactacatctaacccataacacactatactctatcactacatctaacccataacacactatactctatcattacatctaacccataacacactatactctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcactacatctaacccataacacactgtactctatcattacatctaacccataacacactatactctaccattacatctaacccataacacactatactcctctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcactacatctaacccataataCACTacactctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcattacatctaacccataacacactatactcctctatcattacatctaacccataacacactatactcctctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcactacatctaacccataacacactatactctagcactacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcattacatctaacccataacacactatactctatcactacatctaacccataacacactatactctatcactacatctaacccataacacactatactctatcactacatctaacccataacacactatactcctctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcattacatctaacccataacacactatactcctctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactgtactctatcactacatctaacccataacacactatactctagcactacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactctatcattacatctaacccataacacactatactcctctatcactacatctaacccataacacactatactcctctatcattacatctttcccataacacactatactcctctatcattacatctaacccataacacactatactcctctatcactacatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8026 True 1534 lncRNA 0.34 2 7903537 7905319

Neighbor

gene id symbol gene type direction distance location
LOC110528839 LOC106574168 coding upstream 20651 7840680 ~ 7882886 (+)
LOC110528753 LOC106574165 coding upstream 63603 7741562 ~ 7839951 (+)
LOC110528450 LOC106574163 coding upstream 353143 7414613 ~ 7550394 (+)
LOC118966183 NA coding upstream 572495 7330452 ~ 7331042 (+)
ankle1 LOC106574192 coding upstream 796028 7096299 ~ 7107509 (+)
LOC118966768 NA coding downstream 47474 7952793 ~ 7952888 (+)
nmur1a LOC106574171 coding downstream 143676 8048995 ~ 8085970 (+)
LOC110529397 LOC106574172 coding downstream 246754 8152073 ~ 8162387 (+)
LOC100135997 LOC100135997 coding downstream 276918 8117910 ~ 8197019 (+)
LOC110529481 LOC106574173 coding downstream 282610 8187929 ~ 8191228 (+)
G6526 NA non-coding upstream 5434 7897795 ~ 7898103 (+)
G6522 NA non-coding upstream 9293 7893755 ~ 7894244 (+)
G6501 NA non-coding upstream 58121 7844845 ~ 7845416 (+)
G6445 NA non-coding upstream 163713 7739625 ~ 7739824 (+)
G6803 NA non-coding downstream 128165 8033484 ~ 8033732 (+)
G6812 NA non-coding downstream 135716 8041035 ~ 8041418 (+)
G6838 NA non-coding downstream 162616 8067935 ~ 8068262 (+)
G6844 NA non-coding downstream 171051 8076370 ~ 8076598 (+)
G6518 NA other upstream 17630 7885391 ~ 7885907 (+)
G6434 NA other upstream 177928 7725046 ~ 7725609 (+)
G5581 NA other upstream 1091916 6810994 ~ 6811621 (+)
G5276 NA other upstream 1385348 6517482 ~ 6518189 (+)
G3597 NA other upstream 3046472 4856525 ~ 4857065 (+)
G6807 NA other downstream 131298 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 323978 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 349823 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1553629 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 2078456 9980527 ~ 9991542 (+)

Expression


Co-expression Network