G6838


Basic Information

Item Value
gene id G6838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8067935 ~ 8068262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8437
aacccTTCACACTATACTACTGATATAACccttcacactagactactgacataacccctcacactagactactgacataacccctcacactagactactgacataacccctcacactagactactgacataacccctcacactagactactgacataacccttcACACTAGATTACTGatacaacccctcacactagactactgatataacccTTCACACTAGACTACTACTTTCCAATATGTGAACTATAGGCTAAGAGAGCTTCATCAGCTGTGTATTGATTGTGGGGGTTGGATAGTGTGAGAAGACAACATCACAACATGGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8437 True 328 lncRNA 0.40 1 8067935 8068262

Neighbor

gene id symbol gene type direction distance location
LOC118966768 NA coding upstream 115047 7952793 ~ 7952888 (+)
LOC110528925 hykk coding upstream 132718 7900761 ~ 7935217 (+)
LOC110528839 LOC106574168 coding upstream 185049 7840680 ~ 7882886 (+)
LOC110528753 LOC106574165 coding upstream 228001 7741562 ~ 7839951 (+)
LOC110528450 LOC106574163 coding upstream 517541 7414613 ~ 7550394 (+)
LOC110529397 LOC106574172 coding downstream 83811 8152073 ~ 8162387 (+)
LOC100135997 LOC100135997 coding downstream 113975 8117910 ~ 8197019 (+)
LOC110529481 LOC106574173 coding downstream 119667 8187929 ~ 8191228 (+)
LOC110529566 LOC106574176 coding downstream 124420 8192682 ~ 8199666 (+)
LOC110497697 LOC106574176 coding downstream 141071 8209333 ~ 8213887 (+)
nmur1a LOC106574171 non-coding upstream 18648 8048995 ~ 8085970 (+)
G6812 NA non-coding upstream 26517 8041035 ~ 8041418 (+)
G6803 NA non-coding upstream 34203 8033484 ~ 8033732 (+)
G6497 NA non-coding upstream 162616 7903537 ~ 7905319 (+)
G6526 NA non-coding upstream 169832 7897795 ~ 7898103 (+)
G6844 NA non-coding downstream 8108 8076370 ~ 8076598 (+)
G6821 NA non-coding downstream 17767 8086029 ~ 8087745 (+)
G6912 NA non-coding downstream 76784 8145046 ~ 8147477 (+)
G6946 LOC106574176 non-coding downstream 141200 8209462 ~ 8225068 (+)
G6807 NA other upstream 30781 8036617 ~ 8037154 (+)
G6518 NA other upstream 182028 7885391 ~ 7885907 (+)
G6434 NA other upstream 342326 7725046 ~ 7725609 (+)
G5581 NA other upstream 1256314 6810994 ~ 6811621 (+)
G5276 NA other upstream 1549746 6517482 ~ 6518189 (+)
LOC110501328 LOC106574178 other downstream 161035 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 186880 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1390686 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1915513 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 2072982 10140230 ~ 10162948 (+)

Expression


Co-expression Network