G6967


Basic Information

Item Value
gene id G6967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8243283 ~ 8249184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8589
gttttttaaagacCAGGGAATGTGAAAAGGTTTAGACCGATATTTAACCTATTTAAAACTGCTTCCATGCAGTGATGGAAATGAACCCAAAAGATAAGTtagatacaacaggtgtagtagaccttacattgaaatgctgaatacaacaggtgtagtaggccttacagtgaaatgctgaatacaacaggtgtagtagaccttacattgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgccgaatacaacaggtgtagtagaccttacagtgaaatgccgaatacaacaggtgtagtagaccttacagtgaaatgcttacttacaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8589 True 339 lncRNA 0.40 2 8243283 8249184

Neighbor

gene id symbol gene type direction distance location
LOC110501328 LOC106574178 coding upstream 11717 8229189 ~ 8231566 (+)
LOC118943893 LOC106574176 coding upstream 18016 8224365 ~ 8225267 (+)
LOC110497697 LOC106574176 coding upstream 29396 8209333 ~ 8213887 (+)
LOC110529566 LOC106574176 coding upstream 43617 8192682 ~ 8199666 (+)
LOC110529481 LOC106574173 coding upstream 52055 8187929 ~ 8191228 (+)
LOC110505168 LOC106574179 coding downstream 6689 8255142 ~ 8271732 (+)
LOC110529807 pfn2 coding downstream 237470 8486654 ~ 8494344 (+)
LOC110515166 ankub1 coding downstream 353541 8602725 ~ 8612667 (+)
LOC110532690 NA coding downstream 375702 8624886 ~ 8634174 (+)
LOC110519734 ankub1 coding downstream 417985 8667169 ~ 8693760 (+)
G6964 NA non-coding upstream 2559 8240435 ~ 8240724 (+)
G6946 LOC106574176 non-coding upstream 18215 8209462 ~ 8225068 (+)
LOC100135997 LOC100135997 non-coding upstream 46264 8117910 ~ 8197019 (+)
G6912 NA non-coding upstream 95806 8145046 ~ 8147477 (+)
G6821 NA non-coding upstream 155538 8086029 ~ 8087745 (+)
G6969 NA non-coding downstream 3278 8252462 ~ 8252670 (+)
G6978 NA non-coding downstream 14466 8263650 ~ 8263921 (+)
G6983 NA non-coding downstream 23752 8272936 ~ 8274241 (+)
G6985 NA non-coding downstream 25482 8274666 ~ 8275427 (+)
G7001 NA non-coding downstream 56581 8305765 ~ 8306401 (+)
G6807 NA other upstream 206129 8036617 ~ 8037154 (+)
G6518 NA other upstream 357376 7885391 ~ 7885907 (+)
G6434 NA other upstream 517674 7725046 ~ 7725609 (+)
G5581 NA other upstream 1431662 6810994 ~ 6811621 (+)
LOC118966784 LOC106574127 other downstream 1209764 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1734591 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1892060 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 3227480 11433102 ~ 11514427 (+)

Expression


Co-expression Network