G8144


Basic Information

Item Value
gene id G8144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9526496 ~ 9677481 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9968
CTACCTGCTAAGTATAAAGATTATTAAACTAGATTCAGTGGGCTTGTCATTCACAGCACTGATGAAAAATCAAGTACAGTTGATCTAAATGTGGATATACGAGGACATCTAGTGGTCaccggatttaaaaaaaaattcatgCAAGCTATCTTTGCACTAGCATGCGATGCCATATATTTCACGCaggtatttatttttcaacatgtATTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9968 True 213 lncRNA 0.37 2 9526496 9677481

Neighbor

gene id symbol gene type direction distance location
LOC118936734 LOC106574127 coding upstream 13021 9505888 ~ 9513475 (+)
LOC118936706 LOC106574155 coding upstream 30217 9493321 ~ 9496279 (+)
LOC118936730 LOC106574155 coding upstream 36975 9488950 ~ 9489521 (+)
LOC110510917 LOC106574155 coding upstream 42886 9481039 ~ 9483610 (+)
LOC118936726 LOC106574155 coding upstream 49237 9476688 ~ 9477259 (+)
LOC118937070 LOC106574127 coding downstream 313 9677794 ~ 9705942 (+)
LOC118937357 LOC106574127 coding downstream 19542 9676218 ~ 9726523 (+)
LOC118937403 LOC106574155 coding downstream 53523 9731004 ~ 9737800 (+)
LOC110510916 LOC106574155 coding downstream 64424 9741905 ~ 9756269 (+)
LOC118937415 LOC106574155 coding downstream 80457 9757938 ~ 9780167 (+)
G8075 NA non-coding upstream 159397 9366476 ~ 9367099 (+)
G8032 NA non-coding upstream 211072 9312415 ~ 9315424 (+)
G8031 NA non-coding upstream 222386 9303962 ~ 9304110 (+)
G8030 NA non-coding upstream 222908 9303092 ~ 9303588 (+)
G8176 NA non-coding downstream 11429 9688910 ~ 9690104 (+)
G8191 NA non-coding downstream 28715 9706196 ~ 9785562 (+)
G8200 NA non-coding downstream 94583 9772064 ~ 9933555 (+)
G8225 NA non-coding downstream 181923 9859404 ~ 9915393 (+)
G8231 NA non-coding downstream 214936 9892417 ~ 9931446 (+)
LOC118966784 LOC106574127 other upstream 66543 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1270618 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1296261 8229189 ~ 8231566 (+)
G6807 NA other upstream 1489342 8036617 ~ 8037154 (+)
G6518 NA other upstream 1640589 7885391 ~ 7885907 (+)
LOC110510920 LOC106574155 other downstream 306294 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 463763 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 1799183 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3561132 13238613 ~ 13295452 (+)
G12410 NA other downstream 3951382 13617059 ~ 13666871 (+)

Expression


Co-expression Network