G8158


Basic Information

Item Value
gene id G8158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9575836 ~ 9788175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9982
ATTCTCttcaactcttcttgaactgcactgtttgttaagggcttgtaagtaaagtaTTTCACGGAaagatctacacttgttgtattcagcgcatgtgacaaataaagtttgagttgatttgatttgactatgtACCTTCTAAGCATGATGGTTGGCTCATGATTTGTTTGTACTGAAATCTATTCAGGGAGGATAAGGGTATATCATaggcagtgatgtagtggtaaaaccATTGACTGGTAAATGCTGATTGCCGTTCAGGATTAAAGAAGTAACGCTCCCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9982 True 285 lncRNA 0.40 2 9575836 9788175

Neighbor

gene id symbol gene type direction distance location
LOC110522382 LOC106574127 coding upstream 3256 9564492 ~ 9572580 (+)
LOC110517099 LOC106574127 coding upstream 20058 9552260 ~ 9555778 (+)
LOC118966312 LOC106574127 coding upstream 24789 9544337 ~ 9551047 (+)
LOC118936861 LOC106574155 coding upstream 40837 9527471 ~ 9534999 (+)
LOC118936734 LOC106574127 coding upstream 62361 9505888 ~ 9513475 (+)
LOC118966328 LOC106574127 coding downstream 11498 9799673 ~ 9802451 (+)
LOC118936500 LOC106574127 coding downstream 14281 9802456 ~ 9806644 (+)
LOC110515163 LOC106574155 coding downstream 31042 9819217 ~ 9826268 (+)
LOC110511657 LOC106574155 coding downstream 37834 9826009 ~ 9828460 (+)
LOC110515172 LOC106574127 coding downstream 49353 9837528 ~ 9845115 (+)
G8157 NA non-coding upstream 1307 9573645 ~ 9574529 (+)
G8143 NA non-coding upstream 14657 9520787 ~ 9561179 (+)
G8142 NA non-coding upstream 18676 9516855 ~ 9557160 (+)
LOC110510917 LOC106574155 non-coding upstream 92262 9481039 ~ 9483610 (+)
G8075 NA non-coding upstream 208737 9366476 ~ 9367099 (+)
G8225 NA non-coding downstream 71229 9859404 ~ 9915393 (+)
G8231 NA non-coding downstream 104242 9892417 ~ 9931446 (+)
LOC118937372 LOC106574127 non-coding downstream 119631 9900861 ~ 9925501 (+)
G8238 NA non-coding downstream 139664 9927839 ~ 9947260 (+)
G8263 NA non-coding downstream 219835 10008010 ~ 10008505 (+)
LOC118966784 LOC106574127 other upstream 115883 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1319958 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1345601 8229189 ~ 8231566 (+)
G6807 NA other upstream 1538682 8036617 ~ 8037154 (+)
G6518 NA other upstream 1689929 7885391 ~ 7885907 (+)
LOC110510920 LOC106574155 other downstream 195600 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 353069 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 1688489 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3450438 13238613 ~ 13295452 (+)
G12410 NA other downstream 3840688 13617059 ~ 13666871 (+)

Expression


Co-expression Network