Gene
RNA
| Item | Value |
|---|---|
| gene id | G8200 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 9772064 ~ 9933555 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106601750 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU10036 | False | 344 | lncRNA | 0.54 | 2 | 9772064 | 9794426 |
| TU10034 | True | 389 | lncRNA | 0.44 | 3 | 9793843 | 9933555 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510916 | LOC106574155 | coding | upstream | 15795 | 9741905 ~ 9756269 (+) |
| LOC118937403 | LOC106574155 | coding | upstream | 34264 | 9731004 ~ 9737800 (+) |
| LOC118937357 | LOC106574127 | coding | upstream | 45541 | 9676218 ~ 9726523 (+) |
| LOC118937070 | LOC106574127 | coding | upstream | 66122 | 9677794 ~ 9705942 (+) |
| LOC118937339 | LOC106574127 | coding | upstream | 103591 | 9637743 ~ 9668473 (+) |
| LOC118966382 | LOC106574155 | coding | downstream | 3610 | 9937165 ~ 9945082 (+) |
| LOC118937321 | LOC106574127 | coding | downstream | 23123 | 9956678 ~ 9964323 (+) |
| LOC110510920 | LOC106574155 | coding | downstream | 46972 | 9980527 ~ 9991542 (+) |
| LOC110533060 | gnb4 | coding | downstream | 79146 | 10012701 ~ 10048677 (+) |
| ftsj3 | ftsj3 | coding | downstream | 153745 | 10087300 ~ 10096757 (+) |
| G8176 | NA | non-coding | upstream | 81960 | 9688910 ~ 9690104 (+) |
| G8144 | NA | non-coding | upstream | 94583 | 9526496 ~ 9677481 (+) |
| LOC118937346 | LOC106574127 | non-coding | upstream | 124251 | 9586463 ~ 9647813 (+) |
| LOC118937363 | LOC106574127 | non-coding | upstream | 148160 | 9613655 ~ 9623904 (+) |
| G8263 | NA | non-coding | downstream | 74455 | 10008010 ~ 10008505 (+) |
| G8264 | NA | non-coding | downstream | 75465 | 10009020 ~ 10009350 (+) |
| G8265 | NA | non-coding | downstream | 77461 | 10011016 ~ 10011230 (+) |
| G8266 | NA | non-coding | downstream | 78295 | 10011850 ~ 10012067 (+) |
| G8253 | NA | non-coding | downstream | 117486 | 10051041 ~ 10053076 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 312111 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 1516186 | 8255142 ~ 8271732 (+) |
| LOC110501328 | LOC106574178 | other | upstream | 1541829 | 8229189 ~ 8231566 (+) |
| G6807 | NA | other | upstream | 1734910 | 8036617 ~ 8037154 (+) |
| G6518 | NA | other | upstream | 1886157 | 7885391 ~ 7885907 (+) |
| gipc3 | LOC106574151 | other | downstream | 207689 | 10140230 ~ 10162948 (+) |
| LOC110523899 | LOC106574090 | other | downstream | 1543109 | 11433102 ~ 11514427 (+) |
| LOC110538561 | LOC106574035 | other | downstream | 3305058 | 13238613 ~ 13295452 (+) |
| G12410 | NA | other | downstream | 3695308 | 13617059 ~ 13666871 (+) |
