G8295


Basic Information

Item Value
gene id G8295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 10081168 ~ 10083667 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU10148
ggggttaaggttagggtttaggggtatGGACGTCCCAATGAGCCCAGATAGCAATGACCTGAATCAACGCTGTCAGTGCTGCTGCCGAAGTTATCGCCTTCTAGCATCAGTGGCCTGTGGATGGCGGTTACCCGGTGACTGTCATCATTTGTCAAAGTCGATACATGAAACACTACCTACCTGTAGGACCTTAAGAAACACTTGAGTTTTTTGGCCACGCAATCTGAGTGACTATAATCCGAATAAATTTGATTTTCTCTCAGACAACCGACCATTTTAAGGACTTGGATTCAATTATTTTTCTCATTTGACTTTCAAACGGTGCGGATATAACGTTAAATCATGGAACGCTAAAATGGAGAGGAAGAAAAAGGTGTTGGTATTTGAGCCACACGGGCCATTGGGGCCATCATTTTGGTGACGGCTGCAGCAAGTGCTTTCTCTGTGCTTGGACTGATCAACACACGCTCCAGAAACAGAACCTTCTGAGGACCCTCAACAACAGCAGTATTGTCCTGTGCTACTGGTCTGGGATTCAAACTTCCCCTCAGTCTTTTGTTTAAGAGGATACCTCATTTATATCCAATGTCATAAAAAAGTATGCATTTATCTATTTCATCGTCCTTTGTATTGAAGGCCAAGCAGACCAAATACTGTATAAGGTAGAGATGTTGCCTAcattaaaatgtaaaatgtctATATTGCTGGAGATACACATTTTGAGATGTTGAAAGGATTGGTTGGGTGAAAATTAAATATAAAATGTG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU10148 True 767 lncRNA 0.46 2 10081168 10083667

Neighbor

gene id symbol gene type direction distance location
LOC110533060 gnb4 coding upstream 32491 10012701 ~ 10048677 (+)
LOC110510920 LOC106574155 coding upstream 93473 9980527 ~ 9991542 (+)
LOC118937321 LOC106574127 coding upstream 116845 9956678 ~ 9964323 (+)
LOC118966382 LOC106574155 coding upstream 136086 9937165 ~ 9945082 (+)
LOC118937370 LOC106574127 coding upstream 156411 9917155 ~ 9924757 (+)
ftsj3 ftsj3 coding downstream 3633 10087300 ~ 10096757 (+)
asb3 LOC106574148 coding downstream 13276 10096943 ~ 10101637 (+)
lim2.2 LOC106574149 coding downstream 20502 10104169 ~ 10107888 (+)
gipc3 LOC106574151 coding downstream 56563 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 coding downstream 1349435 11433102 ~ 11514427 (+)
G8253 NA non-coding upstream 28092 10051041 ~ 10053076 (+)
G8266 NA non-coding upstream 69101 10011850 ~ 10012067 (+)
G8265 NA non-coding upstream 69938 10011016 ~ 10011230 (+)
G8264 NA non-coding upstream 71818 10009020 ~ 10009350 (+)
G8263 NA non-coding upstream 72663 10008010 ~ 10008505 (+)
G8304 NA non-coding downstream 35343 10119010 ~ 10134267 (+)
G8600 NA non-coding downstream 53667 10137334 ~ 10137566 (+)
G8651 NA non-coding downstream 136677 10220344 ~ 10222076 (+)
G8652 NA non-coding downstream 138590 10222257 ~ 10224611 (+)
G8695 NA non-coding downstream 216215 10299882 ~ 10301188 (+)
LOC118966784 LOC106574127 other upstream 621215 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1825290 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1850933 8229189 ~ 8231566 (+)
G6807 NA other upstream 2044014 8036617 ~ 8037154 (+)
LOC110538561 LOC106574035 other downstream 3154946 13238613 ~ 13295452 (+)
G12410 NA other downstream 3545196 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 4108789 14192456 ~ 14214939 (+)

Expression


Co-expression Network