G8304


Basic Information

Item Value
gene id G8304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 10119010 ~ 10134267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU10165
aataAACTGTGTGTTAAACATTAACACGCCATTGGGAAAGATATGTAGACATATCTCCATTAGCTAGTAATAGGACTTCTAAACTGTCCATTGACAAATAGGACAAAGTTCAAACCATGTTGTTTAACTGAACAGCCTAGTCCATATTCCACACAGAACAGCCTACTGCTATGCCATGGAGAGAAAATATACAGACGAACAATCAAGGGTCAGGGTCGCCCATCAAGGGTTGCTTACCTTGGTGTCCTTGAGCAGCACAGAGGAGTGGAAGCACGCGTGATGCTTGGTGACATAGAGCCTGCCGTGGTAGAGCACCTCCTTCTGCAGGGCACAGATGTatgCATGTAGCAAGTCCTCTGTCTCTGGAATGTCAGGAAACAGCTTGTGGAATGTTTTGTTGTGCTTTATAAAACTACTTTGTGAACCGATGCTTGCAGTCCTCTCCAAACTTCTGTCCACATCGAACGTCCGAGACCTGACAGGGGCTTGTCTGGTGAAAGTTTTGCTCTGCTGCAGCAGCTCCAGTTGGGTTTCCTCCAGACTGAAGGGTTTCCTGCTCTTCTCCAGCATCTTACTCTCCTTCACAGACAATCCTCCGCTCTCCACCTGGTAGCTTTCTTTCATGAAGTGCTTGATTCTAACGATTGCCTTTTCATCCATCTTCCTCAAGAAGGTTTTCAATCGATCTGTCCGGTTTTCAAGCATTCTTCTTCCAACCGGTGTTCCGACTCCAAAACCCCGCTCCACCAGAGATGTTGCACGCCAACTCctggatttgtttttctcccACTCCAGCTATGACGACACATTAAATTAGCTTAAAGCGGACCAAGCCAATCGACCAATGGGAGAGGAGG

Function

NR:

description
GRAM domain-containing protein 3-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU10165 True 857 lncRNA 0.47 5 10119010 10134267

Neighbor

gene id symbol gene type direction distance location
lim2.2 LOC106574149 coding upstream 11122 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 17373 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 22253 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 70333 10012701 ~ 10048677 (+)
LOC110510920 LOC106574155 coding upstream 131315 9980527 ~ 9991542 (+)
gipc3 LOC106574151 coding downstream 5963 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 coding downstream 1298835 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 1530341 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 1711452 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 1769424 11903691 ~ 11906713 (+)
G8295 NA non-coding upstream 35343 10081168 ~ 10083667 (+)
G8253 NA non-coding upstream 65934 10051041 ~ 10053076 (+)
G8266 NA non-coding upstream 106943 10011850 ~ 10012067 (+)
G8265 NA non-coding upstream 107780 10011016 ~ 10011230 (+)
G8264 NA non-coding upstream 109660 10009020 ~ 10009350 (+)
G8600 NA non-coding downstream 3067 10137334 ~ 10137566 (+)
G8651 NA non-coding downstream 86077 10220344 ~ 10222076 (+)
G8652 NA non-coding downstream 87990 10222257 ~ 10224611 (+)
G8695 NA non-coding downstream 165615 10299882 ~ 10301188 (+)
G8764 NA non-coding downstream 283076 10417343 ~ 10420536 (+)
LOC118966784 LOC106574127 other upstream 659057 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1863132 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1888775 8229189 ~ 8231566 (+)
G6807 NA other upstream 2081856 8036617 ~ 8037154 (+)
LOC110538561 LOC106574035 other downstream 3104346 13238613 ~ 13295452 (+)
G12410 NA other downstream 3494596 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 4058189 14192456 ~ 14214939 (+)

Expression


Co-expression Network