G10241


Basic Information

Item Value
gene id G10241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11544703 ~ 11544905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU12244
CCTGGAGAATGACCTCCCGTCACGTCCCCAACCTATACAAACGCTGAACTCATTGAAAGACTTTGAGACTTAACACTATCAGCAGGTCAGATCATAGGTCGAAAGTATATGTTGTATTGATAGACTTTGGTCAGATGATTGTTGTGATCACTGATTGAGTGGAGGAGTTGGAACCATCTGTTTCTGTCTGGAATCTGCTGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12244 True 203 lncRNA 0.40 1 11544703 11544905

Neighbor

gene id symbol gene type direction distance location
LOC110523899 LOC106574090 coding upstream 30276 11433102 ~ 11514427 (+)
gipc3 LOC106574151 coding upstream 1381755 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 1436815 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 1443066 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 1447946 10087300 ~ 10096757 (+)
LOC110534079 LOC106574089 coding downstream 119703 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 300814 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 358786 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 377671 11922576 ~ 12025076 (+)
cpox LOC106573996 coding downstream 492820 12037725 ~ 12043817 (+)
G10236 NA non-coding upstream 2607 11541739 ~ 11542096 (+)
G10226 NA non-coding upstream 6940 11537392 ~ 11537763 (+)
G10223 NA non-coding upstream 10167 11534301 ~ 11534536 (+)
G10208 NA non-coding upstream 29289 11515185 ~ 11515414 (+)
G9980 NA non-coding upstream 167905 11375423 ~ 11376798 (+)
G10247 NA non-coding downstream 4652 11549557 ~ 11549791 (+)
G10265 NA non-coding downstream 18652 11563557 ~ 11563781 (+)
G10277 NA non-coding downstream 27959 11572864 ~ 11573437 (+)
G10313 NA non-coding downstream 76387 11621292 ~ 11621566 (+)
G10317 NA non-coding downstream 81190 11626095 ~ 11626310 (+)
LOC110510920 LOC106574155 other upstream 1553161 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 2084750 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 3288825 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 1693708 13238613 ~ 13295452 (+)
G12410 NA other downstream 2083958 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 2647551 14192456 ~ 14214939 (+)
G13380 NA other downstream 3134445 14679350 ~ 14679578 (+)
G13381 NA other downstream 3134793 14679698 ~ 14680027 (+)

Expression


Co-expression Network