Gene
RNA
| Item | Value |
|---|---|
| gene id | G10500 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 11853634 ~ 11853865 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU12517 | True | 232 | lncRNA | 0.42 | 1 | 11853634 | 11853865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534079 | LOC106574089 | coding | upstream | 186942 | 11664608 ~ 11666692 (+) |
| LOC110523899 | LOC106574090 | coding | upstream | 339207 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | coding | upstream | 1690686 | 10140230 ~ 10162948 (+) |
| lim2.2 | LOC106574149 | coding | upstream | 1745746 | 10104169 ~ 10107888 (+) |
| asb3 | LOC106574148 | coding | upstream | 1751997 | 10096943 ~ 10101637 (+) |
| LOC110534540 | LOC106574080 | coding | downstream | 49826 | 11903691 ~ 11906713 (+) |
| LOC110534688 | LOC106573995 | coding | downstream | 68711 | 11922576 ~ 12025076 (+) |
| cpox | LOC106573996 | coding | downstream | 183860 | 12037725 ~ 12043817 (+) |
| LOC110535080 | LOC106574000 | coding | downstream | 202943 | 12056808 ~ 12072687 (+) |
| LOC110535183 | LOC106574001 | coding | downstream | 261221 | 12115086 ~ 12147336 (+) |
| G10428 | NA | non-coding | upstream | 54398 | 11798256 ~ 11799236 (+) |
| G10431 | NA | non-coding | upstream | 55672 | 11797021 ~ 11797962 (+) |
| G10455 | NA | non-coding | upstream | 63174 | 11790166 ~ 11790460 (+) |
| G10452 | NA | non-coding | upstream | 64886 | 11788440 ~ 11788748 (+) |
| G10446 | NA | non-coding | upstream | 76074 | 11777210 ~ 11777560 (+) |
| ccdc50 | ccd50 | non-coding | downstream | 21956 | 11845719 ~ 11879266 (+) |
| G10506 | NA | non-coding | downstream | 29412 | 11883277 ~ 11884400 (+) |
| G10510 | NA | non-coding | downstream | 35344 | 11889209 ~ 11889516 (+) |
| G10509 | NA | non-coding | downstream | 36307 | 11890172 ~ 11890579 (+) |
| G10512 | NA | non-coding | downstream | 38550 | 11892415 ~ 11892777 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 1862092 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 2393681 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 3597756 | 8255142 ~ 8271732 (+) |
| LOC110538561 | LOC106574035 | other | downstream | 1384748 | 13238613 ~ 13295452 (+) |
| G12410 | NA | other | downstream | 1774998 | 13617059 ~ 13666871 (+) |
| LOC110486057 | NA | other | downstream | 2338591 | 14192456 ~ 14214939 (+) |
| G13380 | NA | other | downstream | 2825485 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 2825833 | 14679698 ~ 14680027 (+) |
