G10692 (LOC100380853)


Basic Information

Item Value
gene id G10692
gene name LOC100380853
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 12217356 ~ 12217585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU12755
CACTTGGAACGAGGGGTTCATGCGGTAATCGggtggaagctgtaacctgtaacatacctcgttcactctcctcaggactttaaatggccccacaaaccgcggacccagcttccgacagggcaggcggaggggcaggttttgggtcgagagccagacccggtcccctggtgaaaacactggggcctcactgcggtgacggtctgcgcCAACTTTCTGGTGCAGTACGGCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12755 True 230 lncRNA 0.51 1 12217356 12217585

Neighbor

gene id symbol gene type direction distance location
mindy4 fam188b coding upstream 52184 12154422 ~ 12165172 (+)
LOC110535183 LOC106574001 coding upstream 70020 12115086 ~ 12147336 (+)
LOC110535080 LOC106574000 coding upstream 144669 12056808 ~ 12072687 (+)
cpox LOC106573996 coding upstream 173539 12037725 ~ 12043817 (+)
LOC110534688 LOC106573995 coding upstream 192280 11922576 ~ 12025076 (+)
LOC110535487 NA coding downstream 32584 12250169 ~ 12253531 (+)
LOC110525067 LOC106574005 coding downstream 40383 12257968 ~ 12312639 (+)
armh1 cssa16h1orf228 coding downstream 243782 12460957 ~ 12473058 (+)
LOC110536107 LOC106574012 coding downstream 267101 12484686 ~ 12496762 (+)
LOC110536612 LOC106574016 coding downstream 459148 12676733 ~ 12695295 (+)
G10691 NA non-coding upstream 4071 12211743 ~ 12213285 (+)
G10657 NA non-coding upstream 50595 12165854 ~ 12166761 (+)
G10596 NA non-coding upstream 119001 12036546 ~ 12098355 (+)
G11015 NA non-coding downstream 95138 12312723 ~ 12318190 (+)
G11089 NA non-coding downstream 124422 12342007 ~ 12342286 (+)
G11099 NA non-coding downstream 137327 12354912 ~ 12355130 (+)
G11101 NA non-coding downstream 140342 12357927 ~ 12358142 (+)
G11102 NA non-coding downstream 140946 12358531 ~ 12358851 (+)
LOC110523899 LOC106574090 other upstream 702974 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 2056070 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 2225814 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 2757403 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 3961478 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 1021028 13238613 ~ 13295452 (+)
G12410 NA other downstream 1411278 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 1974871 14192456 ~ 14214939 (+)
G13380 NA other downstream 2461765 14679350 ~ 14679578 (+)
G13381 NA other downstream 2462113 14679698 ~ 14680027 (+)

Expression


Co-expression Network