G11130


Basic Information

Item Value
gene id G11130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 12415311 ~ 12416032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU13233
gtctaaccagacacctaagtatttgtagttgtccacgtattctaagtcagagccgtccagagtagtgatgttggacaggcgggtaggtgcaggtagcgatcggttgaagagcatgcatttagttttacttgtatttaagagcaattggaggccacggaaggagagttgtatggcattgaagctcgcctggagggttgttaacacagtgtccaaagaagggccggaagtatacagaatggtgtcgtctgcgtagaggtggatcagagactcaccagcagcaagagcgacctcattgatgtatacagagaagagagtcggtccaagaattgaaccctgtggcacccccatagagactgccagaggtccggacaacagaccctccgatttgacacactgaactctatcagagaagtagttggtgaaccaggcgaggcaatcatttgagaaaccaaggctgttgagtctgccgatgaggatgtggtgattgacagagtcgaaagccttggccagatcaatgaatacggctgcacagtaatgtttcttattgatggcggttaagatatcatttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaatcagattgcatagcagagaaggtatggtgagattcgaaatggtcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13233 True 722 lncRNA 0.49 1 12415311 12416032

Neighbor

gene id symbol gene type direction distance location
LOC110525067 LOC106574005 coding upstream 102672 12257968 ~ 12312639 (+)
LOC110535487 NA coding upstream 161780 12250169 ~ 12253531 (+)
mindy4 fam188b coding upstream 250139 12154422 ~ 12165172 (+)
LOC110535183 LOC106574001 coding upstream 267975 12115086 ~ 12147336 (+)
LOC110535080 LOC106574000 coding upstream 342624 12056808 ~ 12072687 (+)
armh1 cssa16h1orf228 coding downstream 45335 12460957 ~ 12473058 (+)
LOC110536107 LOC106574012 coding downstream 68654 12484686 ~ 12496762 (+)
LOC110536612 LOC106574016 coding downstream 260701 12676733 ~ 12695295 (+)
LOC110536795 tnni3k coding downstream 286641 12702673 ~ 12765497 (+)
LOC110536960 LOC106613985 coding downstream 374175 12790207 ~ 12802143 (+)
G11127 NA non-coding upstream 4475 12410597 ~ 12410836 (+)
G11103 NA non-coding upstream 55858 12359227 ~ 12359453 (+)
G11102 NA non-coding upstream 56460 12358531 ~ 12358851 (+)
G11101 NA non-coding upstream 57169 12357927 ~ 12358142 (+)
G11099 NA non-coding upstream 60181 12354912 ~ 12355130 (+)
G11137 NA non-coding downstream 17432 12433464 ~ 12434513 (+)
G11140 NA non-coding downstream 21533 12437565 ~ 12437794 (+)
G11422 NA non-coding downstream 453366 12869398 ~ 12870186 (+)
G11475 NA non-coding downstream 522781 12938813 ~ 12939019 (+)
LOC110523899 LOC106574090 other upstream 900929 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 2254025 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 2423769 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 2955358 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 4159433 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 822581 13238613 ~ 13295452 (+)
G12410 NA other downstream 1212831 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 1776424 14192456 ~ 14214939 (+)
G13380 NA other downstream 2263318 14679350 ~ 14679578 (+)
G13381 NA other downstream 2263666 14679698 ~ 14680027 (+)

Expression


Co-expression Network