G12411


Basic Information

Item Value
gene id G12411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 13617745 ~ 13669028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU14710
agagaacagggaaggagagagagtgagagaacagagaacagggaaggagagagagcgagagagaaagaacagggaaggagagagagagagagaaaacgaacagggaaggagagagagagagaaaaagaacagggaaggagagagagcgagagaaagagagaacggggaaggagagagagcgagacagagaacagggaaggagagagagagagagcgagaacagggaaggagagagagcgagagacagagaacagggaaggagagagagcgagagacagaacagggaaggagagagagcgagagacagagaacaggtaaggagagagagcgagaacagggaaggagagagagcgagaacagggaaggagggagagcgagagacagagaaggagagagagagagaacagggaaggagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14710 True 417 lncRNA 0.45 2 13617745 13669028

Neighbor

gene id symbol gene type direction distance location
pdzk1ip1 LOC106574040 coding upstream 176217 13436016 ~ 13441528 (+)
LOC110485322 LOC106574039 coding upstream 186628 13425566 ~ 13431117 (+)
LOC110485223 LOC106574083 coding upstream 206455 13409282 ~ 13411290 (+)
LOC110538561 LOC106574035 coding upstream 322293 13238613 ~ 13295452 (+)
LOC110526761 LOC106574030 coding upstream 393842 13214771 ~ 13223903 (+)
tm2d1 LOC106574044 coding downstream 65735 13734763 ~ 13753675 (+)
LOC110508285 LOC106574085 coding downstream 471468 14140496 ~ 14144946 (+)
LOC110485648 LOC106574045 coding downstream 493357 14162385 ~ 14171600 (+)
LOC110485979 LOC106574047 coding downstream 503491 14172519 ~ 14185257 (+)
LOC110486057 NA coding downstream 523439 14192456 ~ 14214939 (+)
G12396 NA non-coding upstream 31842 13585704 ~ 13585903 (+)
G12390 NA non-coding upstream 36435 13581105 ~ 13581310 (+)
G12371 NA non-coding upstream 58167 13559335 ~ 13559578 (+)
G12368 NA non-coding upstream 60138 13557369 ~ 13557607 (+)
G12367 NA non-coding upstream 60609 13556927 ~ 13557136 (+)
G12497 NA non-coding downstream 106505 13775533 ~ 13775871 (+)
G12499 NA non-coding downstream 110579 13779607 ~ 13788862 (+)
G12504 NA non-coding downstream 126907 13795935 ~ 13799297 (+)
G12509 NA non-coding downstream 142908 13811936 ~ 13813273 (+)
G12535 NA non-coding downstream 184463 13853491 ~ 13853770 (+)
LOC110523899 LOC106574090 other upstream 2103363 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3456459 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 3626203 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 4157792 9450932 ~ 9460358 (+)
G13380 NA other downstream 1010322 14679350 ~ 14679578 (+)
G13381 NA other downstream 1010670 14679698 ~ 14680027 (+)
G13391 NA other downstream 1031148 14700176 ~ 14700730 (+)
G13434 NA other downstream 1142743 14811771 ~ 14812624 (+)

Expression


Co-expression Network