Gene
RNA
| Item | Value |
|---|---|
| gene id | G12412 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13629753 ~ 13665236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14712 | True | 201 | lncRNA | 0.67 | 2 | 13629753 | 13665236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdzk1ip1 | LOC106574040 | coding | upstream | 188225 | 13436016 ~ 13441528 (+) |
| LOC110485322 | LOC106574039 | coding | upstream | 198636 | 13425566 ~ 13431117 (+) |
| LOC110485223 | LOC106574083 | coding | upstream | 218463 | 13409282 ~ 13411290 (+) |
| LOC110538561 | LOC106574035 | coding | upstream | 334301 | 13238613 ~ 13295452 (+) |
| LOC110526761 | LOC106574030 | coding | upstream | 405850 | 13214771 ~ 13223903 (+) |
| tm2d1 | LOC106574044 | coding | downstream | 69527 | 13734763 ~ 13753675 (+) |
| LOC110508285 | LOC106574085 | coding | downstream | 475260 | 14140496 ~ 14144946 (+) |
| LOC110485648 | LOC106574045 | coding | downstream | 497149 | 14162385 ~ 14171600 (+) |
| LOC110485979 | LOC106574047 | coding | downstream | 507283 | 14172519 ~ 14185257 (+) |
| LOC110486057 | NA | coding | downstream | 527231 | 14192456 ~ 14214939 (+) |
| G12396 | NA | non-coding | upstream | 43850 | 13585704 ~ 13585903 (+) |
| G12390 | NA | non-coding | upstream | 48443 | 13581105 ~ 13581310 (+) |
| G12371 | NA | non-coding | upstream | 70175 | 13559335 ~ 13559578 (+) |
| G12368 | NA | non-coding | upstream | 72146 | 13557369 ~ 13557607 (+) |
| G12367 | NA | non-coding | upstream | 72617 | 13556927 ~ 13557136 (+) |
| G12497 | NA | non-coding | downstream | 110297 | 13775533 ~ 13775871 (+) |
| G12499 | NA | non-coding | downstream | 114371 | 13779607 ~ 13788862 (+) |
| G12504 | NA | non-coding | downstream | 130699 | 13795935 ~ 13799297 (+) |
| G12509 | NA | non-coding | downstream | 146700 | 13811936 ~ 13813273 (+) |
| G12535 | NA | non-coding | downstream | 188255 | 13853491 ~ 13853770 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 2115371 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 3468467 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 3638211 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 4169800 | 9450932 ~ 9460358 (+) |
| G13380 | NA | other | downstream | 1014114 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1014462 | 14679698 ~ 14680027 (+) |
| G13391 | NA | other | downstream | 1034940 | 14700176 ~ 14700730 (+) |
| G13434 | NA | other | downstream | 1146535 | 14811771 ~ 14812624 (+) |
