G12497


Basic Information

Item Value
gene id G12497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 13775533 ~ 13775871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU14829
tcttacatcagccgatgtcacaaagtgctatacagaaacccagcctaaaaccctaaacagcaagcaatgcagatgtagaagcacggtggctaggaaaaactccctggaaaggcaggagcctaggaagaaacctagagaggaacgaggctctgaggggtggccagtcctcttctggctgtgccgggttgagattataacagtacatggccaagatgttcaaacgttcatagatgaccagcatggtcaaataacaataatcacagtggttgtagagggcgcaacaggtcagcacctcaggagtaaatgtcagttggattttcagagccgatcattcagagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14829 True 339 lncRNA 0.50 1 13775533 13775871

Neighbor

gene id symbol gene type direction distance location
tm2d1 LOC106574044 coding upstream 21858 13734763 ~ 13753675 (+)
pdzk1ip1 LOC106574040 coding upstream 334005 13436016 ~ 13441528 (+)
LOC110485322 LOC106574039 coding upstream 344416 13425566 ~ 13431117 (+)
LOC110485223 LOC106574083 coding upstream 364243 13409282 ~ 13411290 (+)
LOC110538561 LOC106574035 coding upstream 480081 13238613 ~ 13295452 (+)
LOC110508285 LOC106574085 coding downstream 364625 14140496 ~ 14144946 (+)
LOC110485648 LOC106574045 coding downstream 386514 14162385 ~ 14171600 (+)
LOC110485979 LOC106574047 coding downstream 396648 14172519 ~ 14185257 (+)
LOC110486057 NA coding downstream 416596 14192456 ~ 14214939 (+)
axdnd1 axdnd1 coding downstream 444296 14220167 ~ 14244412 (+)
G12411 NA non-coding upstream 106505 13617745 ~ 13669028 (+)
G12410 NA non-coding upstream 108662 13617059 ~ 13666871 (+)
G12412 NA non-coding upstream 110297 13629753 ~ 13665236 (+)
G12396 NA non-coding upstream 189630 13585704 ~ 13585903 (+)
G12390 NA non-coding upstream 194223 13581105 ~ 13581310 (+)
G12499 NA non-coding downstream 3736 13779607 ~ 13788862 (+)
G12504 NA non-coding downstream 20064 13795935 ~ 13799297 (+)
G12509 NA non-coding downstream 36065 13811936 ~ 13813273 (+)
G12535 NA non-coding downstream 77620 13853491 ~ 13853770 (+)
G12573 NA non-coding downstream 158229 13934100 ~ 13994776 (+)
LOC110523899 LOC106574090 other upstream 2261151 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3614247 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 3783991 9980527 ~ 9991542 (+)
G13380 NA other downstream 903479 14679350 ~ 14679578 (+)
G13381 NA other downstream 903827 14679698 ~ 14680027 (+)
G13391 NA other downstream 924305 14700176 ~ 14700730 (+)
G13434 NA other downstream 1035900 14811771 ~ 14812624 (+)

Expression


Co-expression Network