G15364



Basic Information


Item Value
gene id G15364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16404100 ~ 16404417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU18034
gtgctcttgttctccatggactttacagtgtcccagaaccttttggcGTTTGTGCTACagaatgcaaatttctgcttgaaaaagctggcctttgctttcctgactgactgtgtgtattggttcctgacttccctgaacagttgcatatcgcggggactattcgatgctattacagtccgccacaggatgtttttgtgctggtcgaggacagtcaggtctggagtgaaccaagggctatatctgttcttagttctgcattttttgaacggagcatgcttatctaagatggtgaggaagttacttttaaagaatgaccag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU18034 True 318 lncRNA 0.48 1 16404100 16404417

Neighbor


gene id symbol gene type direction distance location
LOC118941184 NA coding downstream 68282 16319755 ~ 16335818 (-)
LOC110531395 LOC106613616 coding downstream 108573 16181514 ~ 16295527 (-)
LOC110491230 med16 coding downstream 246291 16149712 ~ 16157809 (-)
LOC110531327 LOC106573923 coding downstream 267807 16114792 ~ 16136293 (-)
LOC110490953 LOC106613612 coding downstream 328300 15995436 ~ 16075800 (-)
LOC110491485 LOC106573921 coding upstream 21695 16426112 ~ 16432609 (-)
LOC118966506 NA coding upstream 192392 16596809 ~ 16601637 (-)
LOC118941208 LOC106573916 coding upstream 200956 16605373 ~ 16608827 (-)
LOC118941412 LOC106573916 coding upstream 318814 16723231 ~ 16726607 (-)
LOC110492040 arrdc2 coding upstream 400213 16804630 ~ 16814764 (-)
G15363 NA non-coding downstream 277 16403561 ~ 16403823 (-)
G15348 NA non-coding downstream 15477 16388327 ~ 16388623 (-)
G15325 NA non-coding downstream 30069 16373646 ~ 16374031 (-)
G15199 NA non-coding downstream 218825 16185045 ~ 16185275 (-)
G15451 NA non-coding upstream 46100 16450517 ~ 16450732 (-)
G15452 NA non-coding upstream 48188 16452605 ~ 16452804 (-)
G15457 NA non-coding upstream 54445 16458862 ~ 16465253 (-)
G15454 LOC106573918 non-coding upstream 81069 16485486 ~ 16486747 (-)
G15481 NA non-coding upstream 175393 16579810 ~ 16592967 (-)
LOC110488740 cdc14a other downstream 1063219 15325555 ~ 15394233 (-)
LOC110488330 LOC106613586 other downstream 1220558 15175297 ~ 15183693 (-)
G14120 antithrombin other downstream 1230070 15114926 ~ 15174030 (-)
LOC110487385 LOC106574065 other downstream 1444832 14955950 ~ 14959313 (-)
G15470 NA other upstream 126630 16531047 ~ 16531476 (-)
LOC110492105 homer3 other upstream 456232 16838135 ~ 16871992 (-)
G16100 LOC106573897 other upstream 727003 17131420 ~ 17136357 (-)
G16161 LOC106573901 other upstream 850819 17255236 ~ 17257241 (-)
LOC110497564 LOC106573866 other upstream 1685463 18089520 ~ 18098678 (-)

Expression



Co-expression Network