G15708


Basic Information

Item Value
gene id G15708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16956190 ~ 16956460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18425
AAATGGACTATCCAACCTTCAGTATAATACATCACAAATGGGCGGAACCTGATAGATGCTGGTTTAAGTGTAATCCCTGACAGGTTTTGGTTAAAGTGTAATCCCTGACAGGTTCTGGTTTAAATGTAATCCCTGACAGGTTCTGGTTCAAGTGTAATCCCTGACAGGTTCTGGTTTAAATGTAATCCCTGACAGGTTCTGGTTCAAATATAATCCCTGACAGGTTCTGGTTTAAATGTAATCCCTGACAGGTTCTGGTTTAAATGTAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18425 True 271 lncRNA 0.52 1 16956190 16956460

Neighbor

gene id symbol gene type direction distance location
LOC110492686 LOC106573907 coding upstream 20306 16933335 ~ 16935884 (+)
LOC110492606 LOC106573909 coding upstream 35245 16916482 ~ 16920945 (+)
ddx49 ddx49 coding upstream 70556 16875696 ~ 16885634 (+)
LOC100135798 LOC100135798 coding upstream 128651 16826020 ~ 16827539 (+)
LOC118941434 NA coding upstream 204736 16730401 ~ 16751454 (+)
LOC110492876 LOC106613263 coding downstream 6537 16962997 ~ 16967790 (+)
LOC110493012 NA coding downstream 20407 16976867 ~ 16980827 (+)
LOC110493316 LOC106573897 coding downstream 26049 16982509 ~ 17136370 (+)
LOC110493709 LOC106573901 coding downstream 287893 17244353 ~ 17256260 (+)
klhl26 LOC106573902 coding downstream 307493 17263953 ~ 17272050 (+)
G15706 rab3a non-coding upstream 3663 16952307 ~ 16952527 (+)
G15705 NA non-coding upstream 5219 16950385 ~ 16950971 (+)
G15702 NA non-coding upstream 10596 16944649 ~ 16945594 (+)
G15701 NA non-coding upstream 17883 16937536 ~ 16938307 (+)
G15717 NA non-coding downstream 13445 16969905 ~ 16970223 (+)
G15743 NA non-coding downstream 16681 16973141 ~ 16973368 (+)
G15891 NA non-coding downstream 283931 17240391 ~ 17240617 (+)
G15865 NA non-coding downstream 300968 17257428 ~ 17257827 (+)
LOC118941201 NA other upstream 375308 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1240508 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1488202 15447458 ~ 15468011 (+)
G13639 NA other upstream 1994187 14961554 ~ 14962003 (+)
LOC110495874 LOC106573877 other downstream 697747 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1019504 17975918 ~ 17991176 (+)
G17420 NA other downstream 1926263 18882723 ~ 18956208 (+)
G18481 NA other downstream 2608389 19564849 ~ 19565221 (+)

Expression


Co-expression Network