G24440


Basic Information

Item Value
gene id G24440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25120299 ~ 25120654 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU28173
aagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaattctctccatccaacctcactgagctcaagctgttttgcaaggaggaatgggaaaacatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggtgctacaaagtattaacttaagggggctgaataattttgcacgcccgatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28173 True 356 lncRNA 0.38 1 25120299 25120654

Neighbor

gene id symbol gene type direction distance location
plcg2 plcg2 coding upstream 80087 25019010 ~ 25040212 (+)
cotl1 cotl1 coding upstream 147833 24966574 ~ 24972466 (+)
zgc:56622 LOC106573681 coding upstream 171346 24941636 ~ 24948953 (+)
LOC118936285 LOC106573680 coding upstream 181590 24921155 ~ 24938709 (+)
tat LOC106573678 coding upstream 197426 24913610 ~ 24922873 (+)
LOC110519532 LOC106573802 coding downstream 15798 25136452 ~ 25138257 (+)
LOC110520053 NA coding downstream 61183 25181837 ~ 25184028 (+)
LOC110520087 LOC106573690 coding downstream 65495 25186149 ~ 25188147 (+)
LOC110519941 zfpm1 coding downstream 68855 25189509 ~ 25288488 (+)
zc3h18 LOC106573693 coding downstream 261867 25382521 ~ 25409953 (+)
G24439 NA non-coding upstream 309 25119725 ~ 25119990 (+)
G24437 NA non-coding upstream 3839 25116075 ~ 25116460 (+)
G24375 NA non-coding upstream 35575 25083242 ~ 25084724 (+)
G24367 NA non-coding upstream 76101 25042947 ~ 25044198 (+)
G24370 NA non-coding upstream 77523 25040375 ~ 25042776 (+)
G24376 NA non-coding downstream 17683 25138337 ~ 25141245 (+)
G24364 NA non-coding downstream 34075 25154729 ~ 25157356 (+)
G24450 NA non-coding downstream 56999 25177653 ~ 25177876 (+)
G24496 NA non-coding downstream 159001 25279655 ~ 25279874 (+)
G24497 NA non-coding downstream 162542 25283196 ~ 25283397 (+)
G24435 NA other upstream 8438 25111210 ~ 25111861 (+)
G24307 NA other upstream 263048 24856944 ~ 24857251 (+)
G24295 NA other upstream 279837 24839985 ~ 24840462 (+)
G24123 NA other upstream 567864 24550525 ~ 24552435 (+)
ccl4 ccl4 other upstream 614183 24504638 ~ 24506125 (+)
G24365 kiaa0513 other downstream 47163 25167817 ~ 25168328 (+)
LOC110519986 LOC106573695 other downstream 334993 25448856 ~ 25458271 (+)
LOC110520022 LOC106573700 other downstream 591917 25712423 ~ 25732202 (+)
G26858 NA other downstream 1534643 26655297 ~ 26655598 (+)
si:ch211-216l23.2 LOC106573703 other downstream 1559637 26680211 ~ 26696018 (+)

Expression


Co-expression Network