G36438


Basic Information

Item Value
gene id G36438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34469826 ~ 34471046 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU41202
acaccacacactgcatctgactcataccacaccacacactgcatctgacTCATACCACACACGGCATCTGACCCATACAAAaccacacactgcatctgacccatacaacaccacacactgcatctgacCCATACAAAACCACACACGGCATCTGACCCATACAAAACCACACACGGCATCTGACCCATACAACACCACACACTGCACCTGACCCATaccacacactgcatctgacCCACACTGCACCTGACCCATACAACACCACACACTGCACCGGACCCATaccacacactgcatctgacCCACACTGCACCTGacctataccacaccacacactgcacctgacccatacaacaccacacactgcatctgacccataccacaccacacactgcatctgacccataccacaccacacactgcatctgacccataccacaccacacactgcatctgacccataccacaccacacactgcatctgacCCATACCACACTGCACCTGacccataccacaccacacactgcacctgacccataccacaccacacactgcacCTGACCAATACCACACACTGCACCTGacccacaccacacactgcaTTTGACCCATAACACACACTGCATCTGacccataccacaccacacactgcacCTGACCCATACCACACTGCATCTGACCCATACCACACACTGCACCTTACCCATACAACACTGCACCTGacccataccacaccacacactgcatctgacccatacaacactgcatctgacccataccacaccacacactgcatctgacCCATACCACATTGCACCTTACCCATACAACACTGCATCTGacccataccacaccacacactgcatctgacCCATACCACATTGCACCTTACCCATACAACACTGCATCTGacccataccacaccacacactgcatctgacccataccacaccacacactgcacCTGACCCATACCACAATGCATCTGACCCATACcacaccacacactgcatctgacccatacaacaccacacactgcatctgacccatatgtgtgtgtgctctctgtAGTCAGAGGCCTTTTATAAAGGGTTCTGATGCTGGCGGTTCCTTTTCTGTATATGTaattgtgtgtgttactgttgtcAAACCTAGCCTGTAAAGTCAGATATCAAACTAATAAATATGTCAACCATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41202 True 1200 lncRNA 0.51 2 34469826 34471046

Neighbor

gene id symbol gene type direction distance location
LOC110521742 LOC105022204 coding downstream 3115 34459428 ~ 34466711 (-)
LOC118964492 NA coding downstream 167221 34296687 ~ 34302605 (-)
iqsec3b LOC106573430 coding downstream 224438 34200355 ~ 34245388 (-)
LOC110521650 LOC106573438 coding downstream 429387 34025185 ~ 34040439 (-)
si:ch1073-390k14.1 LOC106573523 coding downstream 451383 34009280 ~ 34018443 (-)
LOC110521764 LOC106573421 coding upstream 2922 34473968 ~ 34490179 (-)
cpt1 cpt1 coding upstream 176339 34647385 ~ 34660153 (-)
LOC110521923 LOC106573414 coding upstream 188041 34659087 ~ 34664471 (-)
zp2.3 zp2.3 coding upstream 215704 34686750 ~ 34690959 (-)
LOC118947385 NA coding upstream 385415 34856461 ~ 34868295 (-)
G36209 NA non-coding downstream 18056 34368150 ~ 34451770 (-)
G36202 NA non-coding downstream 22223 34349113 ~ 34447603 (-)
G36055 NA non-coding downstream 330205 34137755 ~ 34139621 (-)
G36050 NA non-coding downstream 344358 34125257 ~ 34125468 (-)
G36045 NA non-coding downstream 354784 34114820 ~ 34115042 (-)
G36471 NA non-coding upstream 50260 34521306 ~ 34521569 (-)
G36491 NA non-coding upstream 81632 34552678 ~ 34554757 (-)
G36579 NA non-coding upstream 227753 34698799 ~ 34703817 (-)
G36585 NA non-coding upstream 234854 34705900 ~ 34706163 (-)
G36588 NA non-coding upstream 242159 34713205 ~ 34808214 (-)
G36196 NA other downstream 88594 34341562 ~ 34381232 (-)
G36141 NA other downstream 107090 34277700 ~ 34362736 (-)
G35628 NA other downstream 601781 33867558 ~ 33868045 (-)
G35299 NA other downstream 1017413 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 1361329 33107119 ~ 33108497 (-)
G37310 LOC106573403 other upstream 802663 35273709 ~ 35278005 (-)
G37907 NA other upstream 969872 35440918 ~ 35441328 (-)
G37976 NA other upstream 1112246 35583292 ~ 35583608 (-)
G38045 LOC106573386 other upstream 1250394 35721440 ~ 35722056 (-)
LOC110522187 LOC106573361 other upstream 1899048 36370091 ~ 36409064 (-)

Expression


Co-expression Network