G58369


Basic Information

Item Value
gene id G58369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53425540 ~ 53425822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64906
gCAGCAGCGacttcaggagactgaagaaattcagcttggcccgtaagaccctcacaaacttttacagatgctccATTGAGAGAGTCCTGTtcggctgtatcaccgcttggtacggcaactgcaccatctgcaaccgcagggctctccagagggtggtgcggcctGCCCAAACATCATCTGGggtacactgcctgccctccaggacatctatagcacccggtgtcacagcaaggccaagaagatcatcaaggacctcagccacattctgactgatggcagccca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64906 True 283 lncRNA 0.43 1 53425540 53425822

Neighbor

gene id symbol gene type direction distance location
LOC110525096 LOC106573053 coding upstream 2786 53399050 ~ 53422754 (+)
LOC110532423 LOC106561694 coding upstream 52078 53355751 ~ 53373462 (+)
LOC110525022 LOC106573057 coding upstream 129055 53250609 ~ 53296485 (+)
LOC110525010 LOC106573059 coding upstream 192366 53187018 ~ 53233174 (+)
LOC110524999 LOC106573060 coding upstream 243780 53159233 ~ 53181760 (+)
LOC110525151 LOC106561689 coding downstream 11712 53437534 ~ 53485553 (+)
LOC110525170 LOC106573051 coding downstream 66024 53491846 ~ 53557609 (+)
LOC110516195 LOC106581842 coding downstream 172372 53598194 ~ 53620959 (+)
LOC118936380 LOC106581842 coding downstream 207008 53632830 ~ 53705421 (+)
LOC118964886 NA coding downstream 259579 53685401 ~ 53686098 (+)
G58181 NA non-coding upstream 88229 53334741 ~ 53337311 (+)
G58187 NA non-coding upstream 110555 53233535 ~ 53314985 (+)
G58278 NA non-coding upstream 219283 53204076 ~ 53206257 (+)
G58192 NA non-coding upstream 393587 53031123 ~ 53031953 (+)
G58230 NA non-coding upstream 428110 52997224 ~ 52997430 (+)
G58371 NA non-coding downstream 805 53426627 ~ 53426922 (+)
G58372 NA non-coding downstream 1142 53426964 ~ 53427210 (+)
G58346 LOC106561689 non-coding downstream 11764 53437586 ~ 53558274 (+)
G58840 NA non-coding downstream 161140 53586962 ~ 53587198 (+)
G58843 NA non-coding downstream 164091 53589913 ~ 53590161 (+)
LOC110524575 fgf3 other upstream 1974605 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3341544 50037523 ~ 50184257 (+)
G53181 NA other upstream 4531628 48893497 ~ 48893912 (+)
G52324 NA other upstream 5042283 48380542 ~ 48383257 (+)
G52080 NA other upstream 5400582 48006674 ~ 48024958 (+)
G59031 NA other downstream 562318 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 619027 54044813 ~ 54089850 (+)
G59963 NA other downstream 1295366 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 2479686 55905508 ~ 55923376 (+)

Expression


Co-expression Network