G58846


Basic Information

Item Value
gene id G58846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53590934 ~ 53591463 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65419
ccaatagactatgtacagctgcagcgatcggttagctgctcagatagctgatgtttgaagttggtgagggagataaaagtctccaacttcagcgatttttgcaattcgttccagtcacaggcagcagagtactggaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctagagcgcgtgctacggatgggtgttgccatcgtgaccagtgagctgagataaggcggagctttacctagcatggacttgtagatgacctggagccagtgggtctggcgacgaatatgtagcgagggccagccgactagagcatacaagtcgcagtggtgggtggtataaggtgctttagtgacaaaacggatggcactgtgatagactgcatccagtttgctgagtagagtgttggaagcaattttgtagatgacatcgccgaagtcgaggatcggtaggatagtcagttttactagggtaagcttggcggcgtgagtgaaggaggctttgttgcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65419 True 530 lncRNA 0.39 1 53590934 53591463

Neighbor

gene id symbol gene type direction distance location
LOC110525089 LOC106573055 coding downstream 206458 53373701 ~ 53384476 (-)
LOC110525078 LOC105021811 coding downstream 252450 53334724 ~ 53338484 (-)
LOC110525034 elk3 coding downstream 280809 53298363 ~ 53310125 (-)
ucmab LOC106573148 coding downstream 340031 53238335 ~ 53250903 (-)
LOC110524998 NA coding downstream 506211 53077658 ~ 53084723 (-)
LOC110525255 LOC106573039 coding upstream 122250 53713713 ~ 53758738 (-)
LOC110525178 LOC106581842 coding upstream 170149 53761612 ~ 53774544 (-)
LOC118964330 NA coding upstream 187078 53778541 ~ 53780182 (-)
LOC118964334 NA coding upstream 209566 53801029 ~ 53802670 (-)
LOC118964895 LOC106581842 coding upstream 222522 53813985 ~ 53822325 (-)
G58819 NA non-coding downstream 27724 53562953 ~ 53563210 (-)
G58751 NA non-coding downstream 29481 53465915 ~ 53561453 (-)
G58804 NA non-coding downstream 49714 53535776 ~ 53541220 (-)
G58778 NA non-coding downstream 72367 53499692 ~ 53518567 (-)
G58730 NA non-coding downstream 154917 53435761 ~ 53436017 (-)
G58850 NA non-coding upstream 5660 53597123 ~ 53597796 (-)
G58926 NA non-coding upstream 41191 53632654 ~ 53634966 (-)
G58954 NA non-coding upstream 168229 53759692 ~ 53760058 (-)
G59104 NA non-coding upstream 239284 53830747 ~ 53835745 (-)
G59110 NA non-coding upstream 265103 53856566 ~ 53917269 (-)
G58842 NA other downstream 2164 53588422 ~ 53588770 (-)
G58718 LOC100194703 other downstream 164618 53425964 ~ 53426316 (-)
G58565 LOC106561659 other downstream 450630 53139458 ~ 53140304 (-)
G57742 NA other downstream 1094700 52495898 ~ 52496234 (-)
G58958 LOC106581842 other upstream 200367 53791830 ~ 53797014 (-)
G59978 NA other upstream 1137668 54729131 ~ 54737244 (-)
G60516 NA other upstream 1478929 55070392 ~ 55070899 (-)
G60572 NA other upstream 1558778 55150241 ~ 55154258 (-)

Expression


Co-expression Network