G59050


Basic Information

Item Value
gene id G59050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54019810 ~ 54020016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65645
GCTATTTTGAATAATTGTGTAATTAATCAAACcattgaaatatatttttgacGATTTCCAACTAACAAGCTAATGTAAACTCACCatattccgtacaaatgtgcgcaactgcgactctttatagtgttttatttacattttagaggcaataaggtgataagttggacctTCTCACTACCACGCATTAgattcgcttccccacccgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65645 True 207 lncRNA 0.36 1 54019810 54020016

Neighbor

gene id symbol gene type direction distance location
LOC110525297 LOC106573037 coding upstream 53307 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 81334 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 115965 53886920 ~ 53903845 (+)
LOC118936380 LOC106581842 coding upstream 314389 53632830 ~ 53705421 (+)
LOC110525327 LOC106573036 coding downstream 24797 54044813 ~ 54089850 (+)
LOC118964411 NA coding downstream 222805 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 262923 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 400406 54420422 ~ 54444532 (+)
adal adal coding downstream 425439 54445455 ~ 54464446 (+)
G59049 NA non-coding upstream 1184 54018266 ~ 54018626 (+)
G59030 NA non-coding upstream 32414 53986530 ~ 53987396 (+)
G59032 NA non-coding upstream 36558 53982636 ~ 53983252 (+)
G59024 NA non-coding upstream 43197 53976298 ~ 53976613 (+)
G59021 NA non-coding upstream 45851 53973388 ~ 53973959 (+)
G59055 NA non-coding downstream 4292 54024308 ~ 54024832 (+)
G59058 NA non-coding downstream 10938 54030954 ~ 54031158 (+)
G59063 NA non-coding downstream 14510 54034526 ~ 54034784 (+)
G59067 NA non-coding downstream 19035 54039051 ~ 54039412 (+)
G59068 NA non-coding downstream 19738 54039754 ~ 54040443 (+)
G59031 NA other upstream 31213 53988140 ~ 53988597 (+)
LOC110524575 fgf3 other upstream 2568875 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 3935814 50037523 ~ 50184257 (+)
G53181 NA other upstream 5125898 48893497 ~ 48893912 (+)
G59963 NA other downstream 701172 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1885492 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1999460 56019476 ~ 56030371 (+)
G61804 NA other downstream 2226568 56246584 ~ 56247770 (+)

Expression


Co-expression Network