G59256


Basic Information

Item Value
gene id G59256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54122952 ~ 54123238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65872
aaataaagcttaacttgttgttaacctgttgagtgtagggggcagtattttgatgtttggatgaaaaacgtacccaaatgaaactgcctatttctcaggtccagaagctagaatatgcatataaaacactctagagtttccaaaactgtcaaaatattgtctatgagtataacagaactgatattgcaggcgaaaacccgaggaaaataagtgcctcttattttgaaaactccctgttccattgcatgccttccctccatttaaagggatatcaaccagattccttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65872 True 287 lncRNA 0.34 1 54122952 54123238

Neighbor

gene id symbol gene type direction distance location
LOC110525327 LOC106573036 coding upstream 33102 54044813 ~ 54089850 (+)
LOC110525297 LOC106573037 coding upstream 156449 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 184476 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 219107 53886920 ~ 53903845 (+)
LOC118964886 NA coding upstream 436854 53685401 ~ 53686098 (+)
LOC118964411 NA coding downstream 119583 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 159701 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 297184 54420422 ~ 54444532 (+)
adal adal coding downstream 322217 54445455 ~ 54464446 (+)
LOC110532453 reln coding downstream 1103301 55226539 ~ 55523230 (+)
G59255 NA non-coding upstream 2268 54120452 ~ 54120684 (+)
G59071 NA non-coding upstream 80458 54042265 ~ 54042494 (+)
G59069 NA non-coding upstream 82055 54040675 ~ 54040897 (+)
G59068 NA non-coding upstream 82509 54039754 ~ 54040443 (+)
G59262 NA non-coding downstream 10521 54133759 ~ 54133968 (+)
G59263 NA non-coding downstream 11449 54134687 ~ 54134927 (+)
G59265 NA non-coding downstream 12977 54136215 ~ 54136481 (+)
G59268 NA non-coding downstream 17297 54140535 ~ 54140757 (+)
G59276 NA non-coding downstream 30351 54153589 ~ 54153835 (+)
G59031 NA other upstream 134355 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 451679 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2672017 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4038956 50037523 ~ 50184257 (+)
G59963 NA other downstream 597950 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1782270 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1896238 56019476 ~ 56030371 (+)
G61804 NA other downstream 2123346 56246584 ~ 56247770 (+)
G61806 NA other downstream 2126650 56249888 ~ 56252015 (+)

Expression


Co-expression Network