G59296


Basic Information

Item Value
gene id G59296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54180605 ~ 54181626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65912
GGaaaaaacatcttaaagtagAATAGAATGAAACAGAcattctatttttgctctattatagtggccactTTAGATATtgatcaagtgcacaaggctacTACAAAATTAACAGTCAccgagtaaaaaatatataatcccatatcactcactcacacacaaataaaatgttattggtcacatacacatggttagcatatgttaatgcgagtgtagcgaaatgcttgtacacATGTTACTGTCAAGTTTAACACAACAAAAAGCTAGTTAACATTTCAGATTtccagggtccagtaagcaactaacgcgttataacttgaggaacggcaaggagtcgtatagcgaattggttaggttactaaTGTTATCGCATCTGATGTtgtaatgttagttagctaatgttagctgtctGACTTTATTAGCAAGCAAATTTTCACACCATAAACTAAATTATTTGATCAGATGagttggctaatgttgctcaacatttctggTTAGCTAACAGAGAATTCGATCCAGCTAGCAAGGTACTTAACAATGCTaatacttgttccaccacactttctcccctacctcaaactttccaaacgccagttgtttttcggttacagctcatgaagtacgcttcatcaccttctcaccccCCATCTCCatggtcaggcttctcacctaacGTTACCTCTTCGTTATCGTTCAGGGGACGAGATGCTGTAACTGACAAACTGACTTTCCAGAGGGcgcgctgatgctgtaactagtcAAATTGGTTGTCTCTTCTTTCTTCAGTCGCGTGCTACGCTGCATTCTGTTGTTATGCGAACGactggctgagccttggatacagccagtattgctCCAAGAGCACATCACTCGTTCGcttacagccagtagtgatccCACCCCCCAGTTTGCATtactgcatgtttttttttcttccgcGTAAACCAAAGataagaggagacaagatgagtttgtctgtttgcagtatgcatgttgaaggtgGTGTCTTGTCTACGATCATTCGT

Function

NR:

description
PREDICTED: bromodomain-containing protein 8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65912 True 1022 lncRNA 0.45 1 54180605 54181626

Neighbor

gene id symbol gene type direction distance location
LOC110525327 LOC106573036 coding upstream 90755 54044813 ~ 54089850 (+)
LOC110525297 LOC106573037 coding upstream 214102 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 242129 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 276760 53886920 ~ 53903845 (+)
LOC118964886 NA coding upstream 494507 53685401 ~ 53686098 (+)
LOC118964411 NA coding downstream 61195 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 101313 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 238796 54420422 ~ 54444532 (+)
adal adal coding downstream 263829 54445455 ~ 54464446 (+)
LOC110532453 reln coding downstream 1044913 55226539 ~ 55523230 (+)
G59291 NA non-coding upstream 8381 54172012 ~ 54172224 (+)
G59285 NA non-coding upstream 12114 54168274 ~ 54168491 (+)
G59284 NA non-coding upstream 13150 54166287 ~ 54167455 (+)
G59282 NA non-coding upstream 19137 54160895 ~ 54161468 (+)
G59280 NA non-coding upstream 21182 54159222 ~ 54159423 (+)
G59297 NA non-coding downstream 47 54181673 ~ 54181876 (+)
G59299 NA non-coding downstream 1355 54182981 ~ 54183379 (+)
G59300 NA non-coding downstream 2954 54184580 ~ 54185172 (+)
G59378 LOC106573031 non-coding downstream 137703 54319329 ~ 54321609 (+)
G59442 NA non-coding downstream 237059 54418685 ~ 54424308 (+)
G59031 NA other upstream 192008 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 509332 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2729670 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4096609 50037523 ~ 50184257 (+)
G59963 NA other downstream 539562 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1723882 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1837850 56019476 ~ 56030371 (+)
G61804 NA other downstream 2064958 56246584 ~ 56247770 (+)
G61806 NA other downstream 2068262 56249888 ~ 56252015 (+)

Expression


Co-expression Network