G59300


Basic Information

Item Value
gene id G59300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54184580 ~ 54185172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65916
gaataattatgtaaattgttttgacatttgctaaaatgtctaaaaacctgttttcactttgtcattatggggtatcttgtgtagattgctgaggaattttATTTATCTAATCCATTTTTTTAAGGTGGGAACATTACAAAATCTGGAAAGTCAAggcatctgaatactttcccgaaagCACTGTCTATATACAGAACCAGCCAAAAGTTTgttaacacctactcattcaagagttatTTCATTGTTTAAATTTTTTCTACAATGTCGGaaaatagtgaatacatcaaaactatgaaataacacatatggaatcatgtagttaccaaaaaagtgttacacaaatcaaagtggccaccctttgccttgatgatagctttgcacactcttggcattctctcaatcagcttcacctggaatgcctgAAGGAGTTCCCTTGAAGGAGTACCCACAtaggctgagcacttgttagctgctttccttcactctgcggtccaactcatctcaattgggttgatgatgattgtggaggccaggtcatctgacgcaggactcatcactctccttcttggtcaaataggccttacacagcatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU65916 True 593 lncRNA 0.38 1 54184580 54185172

Neighbor

gene id symbol gene type direction distance location
LOC110525327 LOC106573036 coding upstream 94730 54044813 ~ 54089850 (+)
LOC110525297 LOC106573037 coding upstream 218077 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 246104 53913928 ~ 53938476 (+)
LOC110525273 LOC106561706 coding upstream 280735 53886920 ~ 53903845 (+)
LOC118964886 NA coding upstream 498482 53685401 ~ 53686098 (+)
LOC118964411 NA coding downstream 57649 54242821 ~ 54249212 (+)
LOC110525344 pta1 coding downstream 97767 54282939 ~ 54297286 (+)
LOC110525380 LOC106573028 coding downstream 235250 54420422 ~ 54444532 (+)
adal adal coding downstream 260283 54445455 ~ 54464446 (+)
LOC110532453 reln coding downstream 1041367 55226539 ~ 55523230 (+)
G59299 NA non-coding upstream 1201 54182981 ~ 54183379 (+)
G59297 NA non-coding upstream 2704 54181673 ~ 54181876 (+)
G59296 NA non-coding upstream 2954 54180605 ~ 54181626 (+)
G59291 NA non-coding upstream 12356 54172012 ~ 54172224 (+)
G59285 NA non-coding upstream 16089 54168274 ~ 54168491 (+)
G59378 LOC106573031 non-coding downstream 134157 54319329 ~ 54321609 (+)
G59442 NA non-coding downstream 233513 54418685 ~ 54424308 (+)
G59459 NA non-coding downstream 272208 54457380 ~ 54458833 (+)
G59489 NA non-coding downstream 319528 54504700 ~ 54505437 (+)
G59468 LOC100195798 non-coding downstream 333212 54518384 ~ 54533275 (+)
G59031 NA other upstream 195983 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 513307 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2733645 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4100584 50037523 ~ 50184257 (+)
G59963 NA other downstream 536016 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1720336 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1834304 56019476 ~ 56030371 (+)
G61804 NA other downstream 2061412 56246584 ~ 56247770 (+)
G61806 NA other downstream 2064716 56249888 ~ 56252015 (+)

Expression


Co-expression Network