G59442


Basic Information

Item Value
gene id G59442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 54418685 ~ 54424308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU66072
atacggagacttgattacacacaggtggattgtatttatcatcaatagtcatttaggtcaacattggatcattcatggatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagtccaagggggccgaatactttcgcaaggcactgtatatata

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66072 True 342 lncRNA 0.37 2 54418685 54424308

Neighbor

gene id symbol gene type direction distance location
LOC110525344 pta1 coding upstream 121399 54282939 ~ 54297286 (+)
LOC118964411 NA coding upstream 169473 54242821 ~ 54249212 (+)
LOC110525327 LOC106573036 coding upstream 328835 54044813 ~ 54089850 (+)
LOC110525297 LOC106573037 coding upstream 452182 53955795 ~ 53966503 (+)
LOC110525287 LOC106573038 coding upstream 480209 53913928 ~ 53938476 (+)
adal adal coding downstream 21147 54445455 ~ 54464446 (+)
LOC110532453 reln coding downstream 802231 55226539 ~ 55523230 (+)
LOC110532459 NA coding downstream 1138112 55562420 ~ 55671844 (+)
LOC110525494 LOC106573015 coding downstream 1249778 55674086 ~ 55738417 (+)
LOC110525514 LOC106573043 coding downstream 1391063 55815371 ~ 55830186 (+)
G59378 LOC106573031 non-coding upstream 97076 54319329 ~ 54321609 (+)
G59300 NA non-coding upstream 233513 54184580 ~ 54185172 (+)
G59299 NA non-coding upstream 235306 54182981 ~ 54183379 (+)
G59297 NA non-coding upstream 236809 54181673 ~ 54181876 (+)
G59296 NA non-coding upstream 237059 54180605 ~ 54181626 (+)
G59459 NA non-coding downstream 33072 54457380 ~ 54458833 (+)
G59489 NA non-coding downstream 80392 54504700 ~ 54505437 (+)
G59468 LOC100195798 non-coding downstream 94076 54518384 ~ 54533275 (+)
G59525 NA non-coding downstream 146636 54570944 ~ 54571156 (+)
G59542 NA non-coding downstream 168923 54593231 ~ 54594234 (+)
G59031 NA other upstream 430088 53988140 ~ 53988597 (+)
LOC118936380 LOC106581842 other upstream 747412 53632830 ~ 53705421 (+)
LOC110524575 fgf3 other upstream 2967750 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 4334689 50037523 ~ 50184257 (+)
G59963 NA other downstream 296880 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 1481200 55905508 ~ 55923376 (+)
G61284 LOC106573044 other downstream 1595168 56019476 ~ 56030371 (+)
G61804 NA other downstream 1822276 56246584 ~ 56247770 (+)
G61806 NA other downstream 1825580 56249888 ~ 56252015 (+)

Expression


Co-expression Network